RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 MDM4O15151 490 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 P4HA2O15460 535 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 EGFP01133 1207 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 IRF1P10914 325 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 TBXAS1P24557 533 aaPredicted RBP12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 TUBP50607 506 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 GALK1P51570 392 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 SATB1Q01826 763 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 APBA1Q02410 837 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 PDE4CQ08493 712 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 GAB4Q2WGN9 574 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 TMEM196Q5HYL7 178 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 C1orf228Q6PIY5 440 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 TMEM270Q6UE05 265 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 PIGZQ86VD9 579 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 ANKRD52Q8NB46 1076 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 UBA3Q8TBC4 463 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 NDRG1Q92597 394 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 EZH1Q92800 747 aaPredicted RBP12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 IPO9Q96P70 1041 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 CRACR2AQ9BSW2 395 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 DNAI2Q9GZS0 605 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 FAM124BQ9H5Z6 455 aaPredicted RBP12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 PNPLA8Q9NP80 782 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 PRMT8Q9NR22 394 aaPredicted RBP12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 TLR8Q9NR97 1041 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 TSPAN16Q9UKR8 245 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 FBXO4Q9UKT5 387 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 PCDHB4Q9Y5E5 795 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 USP3Q9Y6I4 520 aa12.28□□□□□ -0.44
RABGGTA-216ENST00000560243 ANTXRLA6NF34 631 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 O00370 1275 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 TRDMT1O14717 391 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 GFRA3O60609 400 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 FGFR1OPO95684 399 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 CYP17A1P05093 508 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 TDGF1P13385 188 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 RARGP13631 454 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 BRD2P25440 801 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 YWHAEP62258 255 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 MESP2Q0VG99 397 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 LRRC32Q14392 662 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 SGO2Q562F6 1265 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 HSP90AA4PQ58FG1 418 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 DGKKQ5KSL6 1271 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 GJB7Q6PEY0 223 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 CCDC186Q7Z3E2 898 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 ADGRG2Q8IZP9 1017 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 P2RY13Q9BPV8 354 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 KLF16Q9BXK1 252 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 NACA2Q9H009 215 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 CYLDQ9NQC7 956 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 POLR3BQ9NW08 1133 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 NAGPAQ9UK23 515 aa12.27□□□□□ -0.45
RABGGTA-216ENST00000560243 SPTBN4Q9H254 2564 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 E2F8A0AVK6 867 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 PRR23AA6NEV1 266 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 GREM1O60565 184 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 GABBR2O75899 941 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 NFATC1O95644 943 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 VDRP11473 427 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 SLC9A1P19634 815 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 OPRD1P41143 372 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 TKTL1P51854 596 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 ZNF132P52740 706 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 DMWDQ09019 674 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 CETN1Q12798 172 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 GRSF1Q12849 480 aaKnown RBP eCLIP12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 DHCR24Q15392 516 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 PKDCCQ504Y2 493 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 RAB41Q5JT25 222 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 RHBDF2Q6PJF5 856 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 MAMSTRQ6ZN01 415 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 BHLHA9Q7RTU4 235 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 DDX42Q86XP3 938 aaKnown RBP eCLIP12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 SFTPA1Q8IWL2 248 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 BBS7Q8IWZ6 715 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 SPEM1Q8N4L4 309 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 RBBP8NLQ8NC74 664 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 NELL1Q92832 810 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 NKD2Q969F2 451 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 GBP4Q96PP9 640 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 ULBP1Q9BZM6 244 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 UBXN6Q9BZV1 441 aa12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 UBE2TQ9NPD8 197 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-216ENST00000560243 KIAA1549LQ6ZVL6 1849 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 SLC9A3R1O14745 358 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 XPO1O14980 1071 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 PAEPP09466 180 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 ATP5C1P36542 298 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 MTIF2P46199 727 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 CXCL12P48061 93 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 SLC6A11P48066 632 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 BCAT1P54687 386 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 GCNT1Q02742 428 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 BST2Q10589 180 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 TPD52L1Q16890 204 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 ZNF528Q3MIS6 628 aa12.25□□□□□ -0.45
RABGGTA-216ENST00000560243 C10orf120Q5SQS8 335 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms