RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 IFRD2Q12894 506 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 TDGQ13569 410 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 BTBD8Q5XKL5 378 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 TMEM150AQ86TG1 271 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 NOP9Q86U38 636 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 ERICH1Q86X53 443 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 GAS2L3Q86XJ1 694 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 C18orf8Q96DM3 657 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 TCEAL4Q96EI5 215 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 MCRS1Q96EZ8 462 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 UHRF1Q96T88 793 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 NACA2Q9H009 215 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 RRN3Q9NYV6 651 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 ARHGAP26Q9UNA1 814 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 SORCS3Q9UPU3 1222 aa12.66□□□□□ -0.38
RABGGTA-215ENST00000560207 PRUNE2Q8WUY3 3088 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 SLC9A3R1O14745 358 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 TLR5O60602 858 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 ABL1P00519 1130 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 OAS1P00973 400 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 CYP1A1P04798 512 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 GYPCP04921 128 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 CALB1P05937 261 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 ALADP13716 330 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 PSMC3P17980 439 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 CDC25BP30305 580 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 CASP14P31944 242 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 ZNF75DP51815 510 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 DAOAP59103 153 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 YWHAGP61981 247 aaKnown RBP eCLIP12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 COG7P83436 770 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 ARID5AQ03989 594 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 HTR4Q13639 388 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 ARHGAP29Q52LW3 1261 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 DENND1BQ6P3S1 775 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 C1orf228Q6PIY5 440 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 ARCQ7LC44 396 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 ARID3BQ8IVW6 561 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 MFSD6LQ8IWD5 586 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 YAF2Q8IY57 180 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 MAB21L3Q8N8X9 362 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 RNF139Q8WU17 664 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 ING5Q8WYH8 240 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 OTUB2Q96DC9 234 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 TRIM11Q96F44 468 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 SLC46A2Q9BY10 475 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 ULBP1Q9BZM6 244 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 KCNK12Q9HB15 430 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 TRPV5Q9NQA5 729 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 IMPACTQ9P2X3 320 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 CHORDC1Q9UHD1 332 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 DNMT3LQ9UJW3 386 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 NAGPAQ9UK23 515 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 ZNF510Q9Y2H8 683 aa12.65□□□□□ -0.38
RABGGTA-215ENST00000560207 EYSQ5T1H1 3165 aa12.65□□□□□ -0.39
RABGGTA-215ENST00000560207 KIF26AQ9ULI4 1882 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 AKR1B15C9JRZ8 316 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 HSF2BPO75031 334 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 TADA3O75528 432 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 MMEP08473 750 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 PNMA6AP0CW24 399 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 LCP1P13796 627 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 DESP17661 470 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 CDR1P51861 262 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 MLLT6P55198 1093 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 GSCP56915 257 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 YWHAZP63104 245 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 NOMO3P69849 1222 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 CDK17Q00537 523 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 FMO1Q01740 532 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 CENPCQ03188 943 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 C1QBPQ07021 282 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 FAM78AQ5JUQ0 283 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 TXNDC8Q6A555 127 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 CC2D1AQ6P1N0 951 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 RSRC2Q7L4I2 434 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 GPRIN1Q7Z2K8 1008 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 PHF13Q86YI8 300 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 IRF7Q92985 503 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 EXOC4Q96A65 974 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 MSANTD3Q96H12 275 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 DNAJC7Q99615 494 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 IRX2Q9BZI1 471 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 DCLK3Q9C098 648 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 POPDC2Q9HBU9 364 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 TRPC7Q9HCX4 862 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 ACP6Q9NPH0 428 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 GMIPQ9P107 970 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 TBC1D14Q9P2M4 693 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 LIMD1Q9UGP4 676 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 CDH22Q9UJ99 828 aa12.64□□□□□ -0.39
RABGGTA-215ENST00000560207 A0A1W2PQH9 124 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 SSU72P8A0A1W2PR75 194 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 ANKRD62A6NC57 917 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 E5RJQ4 531 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 TULP2O00295 520 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 CAPN9O14815 690 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 LTFP02788 710 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms