RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 MKRN2Q9H000 416 aaKnown RBP10.1□□□□□ -0.79
NEDD1-211ENST00000557454 RPF1Q9H9Y2 349 aaKnown RBP10.1□□□□□ -0.79
NEDD1-211ENST00000557454 ITM2CQ9NQX7 267 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 THSD1Q9NS62 852 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 CFAP97Q9P2B7 532 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 ADAMTS1Q9UHI8 967 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 UBQLN1Q9UMX0 589 aaKnown RBP10.1□□□□□ -0.79
NEDD1-211ENST00000557454 CPQQ9Y646 472 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 F8P00451 2351 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 CITO14578 2027 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 HOXC11O43248 304 aaPredicted RBP10.09□□□□□ -0.79
NEDD1-211ENST00000557454 CYP3A5P20815 502 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 ABCB4P21439 1286 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 CYP2F1P24903 491 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 OXTRP30559 389 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 AFMP43652 599 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 PDE6CP51160 858 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 RPL10AP62906 217 aaKnown RBP10.09□□□□□ -0.79
NEDD1-211ENST00000557454 NUCB1Q02818 461 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 ZBTB6Q15916 424 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 ZSCAN23Q3MJ62 389 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 ARL13BQ3SXY8 428 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 NUDT18Q6ZVK8 323 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 TAS1R3Q7RTX0 852 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 ADAT2Q7Z6V5 191 aaKnown RBP10.09□□□□□ -0.79
NEDD1-211ENST00000557454 FAM124AQ86V42 546 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 SMC5Q8IY18 1101 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 DCP1BQ8IZD4 617 aaKnown RBP10.09□□□□□ -0.79
NEDD1-211ENST00000557454 SAP25Q8TEE9 199 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 IFT74Q96LB3 600 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 MMS19Q96T76 1030 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 LSG1Q9H089 658 aaKnown RBP10.09□□□□□ -0.79
NEDD1-211ENST00000557454 ZNF768Q9H5H4 540 aaKnown RBP10.09□□□□□ -0.79
NEDD1-211ENST00000557454 C6orf106Q9H6K1 298 aaPredicted RBP10.09□□□□□ -0.79
NEDD1-211ENST00000557454 PCDHB6Q9Y5E3 794 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 MYOFQ9NZM1 2061 aa10.09□□□□□ -0.79
NEDD1-211ENST00000557454 NF1P21359 2839 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 OTOGQ6ZRI0 2925 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 PRRT4C9JH25 899 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 DFNA5O60443 496 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 USP12O75317 370 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 XRCC6P12956 609 aaKnown RBP eCLIP10.08□□□□□ -0.8
NEDD1-211ENST00000557454 CYP11B2P19099 503 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 ELAVL4P26378 380 aaKnown RBP10.08□□□□□ -0.8
NEDD1-211ENST00000557454 LSSP48449 732 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 FOSBP53539 338 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 SLC7A9P82251 487 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 NOLC1Q14978 699 aaKnown RBP eCLIP10.08□□□□□ -0.8
NEDD1-211ENST00000557454 SHBQ15464 509 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 NTRK3Q16288 839 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 ANO4Q32M45 955 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 TTC22Q5TAA0 569 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 WSCD1Q658N2 575 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 GRAMD4Q6IC98 578 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 XKR5Q6UX68 686 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 METTL23Q86XA0 190 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 PLPP6Q8IY26 295 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 SLFN12Q8IYM2 578 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 THEM5Q8N1Q8 247 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 KIAA1958Q8N8K9 716 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 SIPA1Q96FS4 1042 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 ELF4Q99607 663 aaPredicted RBP10.08□□□□□ -0.8
NEDD1-211ENST00000557454 NUP58Q9BVL2 599 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 POLR1BQ9H9Y6 1135 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 OSGEPQ9NPF4 335 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 DNAJC17Q9NVM6 304 aaKnown RBP10.08□□□□□ -0.8
NEDD1-211ENST00000557454 DSEQ9UL01 958 aa10.08□□□□□ -0.8
NEDD1-211ENST00000557454 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.08□□□□□ -0.8
NEDD1-211ENST00000557454 TTC26A0AVF1 554 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 PPFIA2O75334 1257 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 BAG4O95429 457 aaKnown RBP10.07□□□□□ -0.8
NEDD1-211ENST00000557454 IGLV3-19P01714 112 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 CKMT2P17540 419 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 TNFRSF8P28908 595 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 C21orf59P57076 290 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 SKOR1P84550 965 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 ST3GAL1Q11201 340 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 CLN3Q13286 438 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 ORC1Q13415 861 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 STARD3Q14849 445 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 CCDC142Q17RM4 750 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 SKIDA1Q1XH10 827 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 PTRH1Q86Y79 214 aaKnown RBP10.07□□□□□ -0.8
NEDD1-211ENST00000557454 SCFD1Q8WVM8 642 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 SEMA3CQ99985 751 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 PYM1Q9BRP8 204 aaKnown RBP10.07□□□□□ -0.8
NEDD1-211ENST00000557454 RNF38Q9H0F5 515 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 PCED1AQ9H1Q7 454 aa10.07□□□□□ -0.8
NEDD1-211ENST00000557454 CELSR2Q9HCU4 2923 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 ARHGEF35A5YM69 484 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 CCDC169A6NNP5 214 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 GFRA2O00451 464 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 CYB561D2O14569 222 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 EFSO43281 561 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 SPATA31C1P0DKV0 1188 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 ACADMP11310 421 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 SFTPCP11686 197 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 EPHA8P29322 1005 aaPredicted RBP10.06□□□□□ -0.8
NEDD1-211ENST00000557454 TSPY1Q01534 308 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 PPP2R3AQ06190 1150 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms