RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 CCDC114Q96M63 670 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 RTP3Q9BQQ7 232 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 HIPK3Q9H422 1215 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 TMEM161AQ9NX61 479 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.38■□□□□ 0.05
VPS33B-205ENST00000556096 TBX21Q9UL17 535 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 TMEM189-UBE2V1I3L0A0 370 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 MDM4O15151 490 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 NBNO60934 754 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 FBXO21O94952 628 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 HSD17B3P37058 310 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 VCPP55072 806 aaKnown RBP15.37■□□□□ 0.05
VPS33B-205ENST00000556096 MRPS5P82675 430 aaKnown RBP15.37■□□□□ 0.05
VPS33B-205ENST00000556096 CAV1Q03135 178 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 DHX9Q08211 1270 aaKnown RBP15.37■□□□□ 0.05
VPS33B-205ENST00000556096 ADCY1Q08828 1119 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 GPNMBQ14956 572 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 OASLQ15646 514 aaKnown RBP15.37■□□□□ 0.05
VPS33B-205ENST00000556096 CDO1Q16878 200 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 CCDC142Q17RM4 750 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 PLEKHG4Q58EX7 1191 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 CLLU1OSQ5K130 101 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 LRIG3Q6UXM1 1119 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 ZNF365Q70YC5 407 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 STRADAQ7RTN6 431 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 BBOF1Q8ND07 529 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 SLC35B2Q8TB61 432 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 CCHCR1Q8TD31 782 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 SNF8Q96H20 258 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 RUFY1Q96T51 708 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 LRRC4Q9HBW1 653 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 NGRNQ9NPE2 291 aaKnown RBP15.37■□□□□ 0.05
VPS33B-205ENST00000556096 KRT82Q9NSB4 513 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 ASIC3Q9UHC3 531 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 DNPEPQ9ULA0 475 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 ZNF487B1APH4 448 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 CST8O60676 142 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 DAB1O75553 588 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 AP1G2O75843 785 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 ITGAVP06756 1048 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 CD48P09326 243 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 MATKP42679 507 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 HDAC4P56524 1084 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 MAP3K7CLP57077 242 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 GABPB1Q06547 395 aaPredicted RBP15.37■□□□□ 0.05
VPS33B-205ENST00000556096 ADIGQ0VDE8 80 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 UAP1Q16222 522 aaPredicted RBP15.37■□□□□ 0.05
VPS33B-205ENST00000556096 RAB6CQ53S08 254 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 INTS6LQ5JSJ4 861 aaKnown RBP15.37■□□□□ 0.05
VPS33B-205ENST00000556096 RAB41Q5JT25 222 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 THEM5Q8N1Q8 247 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 SMOQ99835 787 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 RAB6CQ9H0N0 254 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 CSNK1G1Q9HCP0 422 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.37■□□□□ 0.05
VPS33B-205ENST00000556096 PCDHB8Q9UN66 801 aa15.37■□□□□ 0.05
VPS33B-205ENST00000556096 I3L4J1 428 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 ENPP3O14638 875 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 POLR3GO15318 223 aaPredicted RBP15.36■□□□□ 0.05
VPS33B-205ENST00000556096 DDHD2O94830 711 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 ATF2P15336 505 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 RAG1P15918 1043 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 KLRC2P26717 231 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 CDH6P55285 790 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 FAM193AP78312 1265 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 TFDP2Q14188 446 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 DPYSL3Q14195 570 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 MAPRE1Q15691 268 aaKnown RBP15.36■□□□□ 0.05
VPS33B-205ENST00000556096 PAN2Q504Q3 1202 aaKnown RBP15.36■□□□□ 0.05
VPS33B-205ENST00000556096 OVOS1Q6IE37 1185 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 SCYL2Q6P3W7 929 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 RHBDF2Q6PJF5 856 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 RFX6Q8HWS3 928 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 COLGALT2Q8IYK4 626 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 SIX6OS1Q8N1H7 587 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 ALLCQ8N6M5 410 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 APBB2Q92870 758 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 SMARCD1Q96GM5 515 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 PKNOX2Q96KN3 472 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 PKMYT1Q99640 499 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 FAM118BQ9BPY3 351 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 PRKAG2Q9UGJ0 569 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 ZNF148Q9UQR1 794 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 TSC2P49815 1807 aa15.36■□□□□ 0.05
VPS33B-205ENST00000556096 GOLGA8KD6RF30 607 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 APOC4-APOC2K7ER74 178 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 TP73O15350 636 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 RNF40O75150 1001 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 KRT14P02533 472 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 APOC2P02655 101 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 NOS2P35228 1153 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 TKTL1P51854 596 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 YWHAZP63104 245 aaKnown RBP15.35■□□□□ 0.05
VPS33B-205ENST00000556096 SLMAPQ14BN4 828 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 SLC25A52Q3SY17 297 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 ERMARDQ5T6L9 678 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 GSTA5Q7RTV2 222 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 ZNF280BQ86YH2 543 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 GOLGA6L1Q8N7Z2 621 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 ZMIZ2Q8NF64 920 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms