RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 B4GALT5O43286 388 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 KRT37O76014 449 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 HAUS5O94927 633 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 ITGB3P05106 788 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 NFICP08651 508 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 MCF2P10911 925 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 PDGFRAP16234 1089 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 PTPN4P29074 926 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 CDH8P55286 799 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 SNX16P57768 344 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 MBTD1Q05BQ5 628 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 ORC1Q13415 861 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 PRKG1Q13976 671 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 PDK2Q15119 407 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 NOMO1Q15155 1222 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 ANKRD20A2Q5SQ80 823 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 WASHC2DQ5SRD0 308 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 CELF3Q5SZQ8 465 aaKnown RBP7.29□□□□□ -1.24
TDP1-213ENST00000555880 TREML2Q5T2D2 321 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 ANKRD20A1Q5TYW2 823 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 TTC39BQ5VTQ0 682 aaPredicted RBP7.29□□□□□ -1.24
TDP1-213ENST00000555880 ANKRD20A3Q5VUR7 823 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 EFCAB12Q6NXP0 572 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 CCDC62Q6P9F0 684 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 GADL1Q6ZQY3 521 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 CLNKQ7Z7G1 428 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 MTDHQ86UE4 582 aaKnown RBP7.29□□□□□ -1.24
TDP1-213ENST00000555880 ZC3H18Q86VM9 953 aaKnown RBP7.29□□□□□ -1.24
TDP1-213ENST00000555880 CHSY1Q86X52 802 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 TRIM50Q86XT4 487 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 SULF1Q8IWU6 871 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 TRIM42Q8IWZ5 723 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 DHX37Q8IY37 1157 aaKnown RBP7.29□□□□□ -1.24
TDP1-213ENST00000555880 MAB21L3Q8N8X9 362 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 C1orf127Q8N9H9 656 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 TRPM4Q8TD43 1214 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 SLC44A1Q8WWI5 657 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 APBB2Q92870 758 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 CFAP36Q96G28 342 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 HPDLQ96IR7 371 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 NUDCD1Q96RS6 583 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 TBC1D10AQ9BXI6 508 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 KLC2Q9H0B6 622 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 FAM124BQ9H5Z6 455 aaPredicted RBP7.29□□□□□ -1.24
TDP1-213ENST00000555880 RNPEPL1Q9HAU8 725 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 CYLDQ9NQC7 956 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 RNF181Q9P0P0 153 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 BTBD7Q9P203 1132 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 TJP2Q9UDY2 1190 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 LNPEPQ9UIQ6 1025 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 KIAA1257Q9ULG3 409 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 CSADQ9Y600 493 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 EVPLQ92817 2033 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 TCRBV7S3A2A0A539 114 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 ZSWIM8A7E2V4 1837 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 LACTBL1A8MY62 500 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 ZBTB42B2RXF5 422 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 KBTBD13C9JR72 458 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 KCNN4O15554 427 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 HBP1O60381 514 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 CCDC22O60826 627 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 TGDSO95455 350 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 CBX6O95503 412 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 SLC25A27O95847 323 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 ZBED1O96006 694 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 STAG3L1P0CL83 205 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 TGM2P21980 687 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 CALB2P22676 271 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 EPHB2P29323 1055 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 CCNG1P51959 295 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 ARFIP2P53365 341 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 OVGP1Q12889 678 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 MTM1Q13496 603 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 KCNJ11Q14654 390 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 TMEM132DQ14C87 1099 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 STILQ15468 1287 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 TAF11Q15544 211 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 HSDL1Q3SXM5 330 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 KBTBD12Q3ZCT8 623 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 BOLA3Q53S33 107 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 EEF1DP3Q658K8 133 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 JADE1Q6IE81 842 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 OR6B2Q6IFH4 312 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 C1orf228Q6PIY5 440 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 C4orf22Q6V702 233 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 SLC26A11Q86WA9 606 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 CDR2LQ86X02 465 aaPredicted RBP7.28□□□□□ -1.24
TDP1-213ENST00000555880 HOMEZQ8IX15 550 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 CTAGE3PQ8IX95 158 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 KIAA0319LQ8IZA0 1049 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 CEP120Q8N960 986 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 FAM13CQ8NE31 585 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.28□□□□□ -1.24
TDP1-213ENST00000555880 SH3TC2Q8TF17 1288 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 STK32AQ8WU08 396 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 MZB1Q8WU39 189 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 UTP4Q969X6 686 aaKnown RBP7.28□□□□□ -1.24
TDP1-213ENST00000555880 TTC17Q96AE7 1141 aa7.28□□□□□ -1.24
TDP1-213ENST00000555880 KLF6Q99612 283 aaPredicted RBP7.28□□□□□ -1.24
TDP1-213ENST00000555880 ELOVL4Q9GZR5 314 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms