RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 ATL3Q6DD88 541 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 ANO7Q6IWH7 933 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 SCARA5Q6ZMJ2 495 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 ACOT1Q86TX2 421 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 DDX42Q86XP3 938 aaKnown RBP eCLIP12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 ALLCQ8N6M5 410 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 FRMD1Q8N878 549 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 TXNDC5Q8NBS9 432 aaKnown RBP12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 PDZD8Q8NEN9 1154 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 GOLGA5Q8TBA6 731 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 DUSP9Q99956 384 aaKnown RBP12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 CSNK1G1Q9HCP0 422 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 ZDHHC4Q9NPG8 344 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 GMIPQ9P107 970 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 TBC1D14Q9P2M4 693 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 HMGXB4Q9UGU5 601 aa12.96□□□□□ -0.33
MTHFD1-207ENST00000554677 PDXKO00764 312 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 AP1G2O75843 785 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 KCNK5O95279 499 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 KLF8O95600 359 aaPredicted RBP12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 APODP05090 189 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 PDIA4P13667 645 aaKnown RBP12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 CCDC130P13994 396 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 GBP1P32455 592 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 P2RY2P41231 377 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 GRIA2P42262 883 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 TNFRSF4P43489 277 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 TUBP50607 506 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 ORC1Q13415 861 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 SGSM1Q2NKQ1 1148 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 RNF43Q68DV7 783 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 SPOPLQ6IQ16 392 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 SV2AQ7L0J3 742 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 TMEM25Q86YD3 366 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 BBS7Q8IWZ6 715 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 C12orf29Q8N999 325 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 TMC2Q8TDI7 906 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 RLN3Q8WXF3 142 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 OTUB2Q96DC9 234 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 SMARCD1Q96GM5 515 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 CHAMP1Q96JM3 812 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 MED10Q9BTT4 135 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 DMAP1Q9NPF5 467 aaPredicted RBP12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 COMMD8Q9NX08 183 aa12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 MBD1Q9UIS9 605 aaPredicted RBP12.95□□□□□ -0.34
MTHFD1-207ENST00000554677 A0A1B0GVL5 298 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 LNP1A1A4G5 178 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 C4orf47A7E2U8 309 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 PATE3B3GLJ2 98 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 HHLA1C9JL84 531 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 CDX4O14627 284 aaPredicted RBP12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 TRIM24O15164 1050 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 HOXC11O43248 304 aaPredicted RBP12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 TBX18O95935 607 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 ADH1CP00326 375 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 ASS1P00966 412 aaKnown RBP12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 NR3C1P04150 777 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 ASPAP45381 313 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 NDST1P52848 882 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 SHC2P98077 582 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 GAD2Q05329 585 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 KDSRQ06136 332 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 HSF5Q4G112 596 aaPredicted RBP12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 CEP57L1Q8IYX8 460 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 NAT16Q8N8M0 369 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 SLC2A14Q8TDB8 520 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 TNIP3Q96KP6 325 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 TWNKQ96RR1 684 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 KLF16Q9BXK1 252 aaPredicted RBP12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 ARHGEF4Q9NR80 690 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 OSER1Q9NX31 292 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 CFAP45Q9UL16 551 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 HPSEQ9Y251 543 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 CHD6Q8TD26 2715 aa12.94□□□□□ -0.34
MTHFD1-207ENST00000554677 ATP8B3O60423 1300 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 GIPC1O14908 333 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 IKBKBO14920 756 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 TULP3O75386 442 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 RPN1P04843 607 aaKnown RBP12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 CMA1P23946 247 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 MAP3K7CLP57077 242 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 MCCD1P59942 119 aaPredicted RBP12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 IRX4P78413 519 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 MAP7D1Q3KQU3 841 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 HTR3DQ70Z44 454 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 GPRIN1Q7Z2K8 1008 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 C11orf74Q86VG3 221 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 UNC93AQ86WB7 457 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 MIB1Q86YT6 1006 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 TAF4BQ92750 862 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 P2RY11Q96G91 374 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 EDEM2Q9BV94 578 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 APOBEC3GQ9HC16 384 aaKnown RBP12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 CD248Q9HCU0 757 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 SPHK2Q9NRA0 654 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 KRT82Q9NSB4 513 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 EXOC1Q9NV70 894 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 CIZ1Q9ULV3 898 aaPredicted RBP12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 TRAF3IP3Q9Y228 551 aa12.93□□□□□ -0.34
MTHFD1-207ENST00000554677 ZDHHC9Q9Y397 364 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms