RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 BEND5Q7L4P6 421 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 MCM10Q7L590 875 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 HOOK3Q86VS8 718 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 CCDC50Q8IVM0 306 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 CHPFQ8IZ52 775 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 ZNF276Q8N554 614 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.78□□□□□ -1.64
ATXN3-227ENST00000554491 ESX1Q8N693 406 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 RASSF8Q8NHQ8 419 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 CTNNBL1Q8WYA6 563 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-227ENST00000554491 E2F7Q96AV8 911 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 PAWRQ96IZ0 340 aaKnown RBP4.78□□□□□ -1.64
ATXN3-227ENST00000554491 CABS1Q96KC9 395 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 ZNF512Q96ME7 567 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-227ENST00000554491 JPH2Q9BR39 696 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-227ENST00000554491 FAM167BQ9BTA0 163 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 NACAP1Q9BZK3 213 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 ZSWIM4Q9H7M6 989 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 KMT5AQ9NQR1 393 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 NCDNQ9UBB6 729 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 STK39Q9UEW8 545 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 TPCN1Q9ULQ1 816 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 STXBP5LQ9Y2K9 1186 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 TNFRSF18Q9Y5U5 241 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 PSME4Q14997 1843 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 LAMB2P55268 1798 aa4.78□□□□□ -1.64
ATXN3-227ENST00000554491 CCDC171Q6TFL3 1326 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 VCANP13611 3396 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 A0A1W2PPC1 479 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 UBA6A0AVT1 1052 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-227ENST00000554491 ERICH2A1L162 156 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 C2orf81A6NN90 581 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 TTC34A8MYJ7 566 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 ADM5C9JUS6 153 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 LIN7AO14910 233 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-227ENST00000554491 FYB1O15117 783 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 CYTH3O43739 400 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 ZEB2O60315 1214 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 RNF8O76064 485 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 LDHAP00338 332 aaKnown RBP4.77□□□□□ -1.65
ATXN3-227ENST00000554491 S100BP04271 92 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-227ENST00000554491 GNAT2P19087 354 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 CCT6AP40227 531 aaKnown RBP4.77□□□□□ -1.65
ATXN3-227ENST00000554491 CLCN2P51788 898 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 MRPL28Q13084 256 aaKnown RBP4.77□□□□□ -1.65
ATXN3-227ENST00000554491 CUL3Q13618 768 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 COG2Q14746 738 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 PTPN14Q15678 1187 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 TTC38Q5R3I4 469 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 C10orf76Q5T2E6 689 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 ADALQ6DHV7 355 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 CAPRIN2Q6IMN6 1127 aaKnown RBP4.77□□□□□ -1.65
ATXN3-227ENST00000554491 HTR3DQ70Z44 454 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 KRT26Q7Z3Y9 468 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 LRP10Q7Z4F1 713 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 NANOGNBQ7Z5D8 188 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 LILRB2Q8N423 598 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 ZBTB8BQ8NAP8 495 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-227ENST00000554491 CHST14Q8NCH0 376 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 ZSWIM2Q8NEG5 633 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 TRIM58Q8NG06 486 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 BRSK1Q8TDC3 778 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 HPS3Q969F9 1004 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 SMARCE1Q969G3 411 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 ERO1AQ96HE7 468 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 C16orf92Q96LL3 132 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 PARD6BQ9BYG5 372 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 UPF3BQ9BZI7 483 aaKnown RBP4.77□□□□□ -1.65
ATXN3-227ENST00000554491 HAPLN2Q9GZV7 340 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 OSBPL2Q9H1P3 480 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 PIF1Q9H611 641 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 NCOA5Q9HCD5 579 aaKnown RBP4.77□□□□□ -1.65
ATXN3-227ENST00000554491 HELLSQ9NRZ9 838 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 POLR3BQ9NW08 1133 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-227ENST00000554491 CLIC5Q9NZA1 410 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 SAMD15Q9P1V8 674 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 ZNF148Q9UQR1 794 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 TRIM17Q9Y577 477 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 DUOX1Q9NRD9 1551 aa4.77□□□□□ -1.65
ATXN3-227ENST00000554491 ZSWIM8A7E2V4 1837 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 MAPK8IP3Q9UPT6 1336 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 PTPDC1A2A3K4 754 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 H0YC42 278 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 IFRD1O00458 451 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-227ENST00000554491 NDUFAB1O14561 156 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 PPIP5K2O43314 1243 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 AKR1B10O60218 316 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 KPNA6O60684 536 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 STAMBPO95630 424 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 CYP1A2P05177 515 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 ALOX15P16050 662 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-227ENST00000554491 H2AFXP16104 143 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-227ENST00000554491 ADRA1BP35368 520 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 CASP2P42575 452 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 MTHFSP49914 203 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 PTTG1IPP53801 180 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 TPD52P55327 224 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-227ENST00000554491 UBASH3AP57075 661 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 SNX16P57768 344 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 SIM2Q14190 667 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms