RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 MLLT6P55198 1093 aaPredicted RBP7.46□□□□□ -1.22
CCDC59-203ENST00000548126 SIM1P81133 766 aaPredicted RBP7.46□□□□□ -1.22
CCDC59-203ENST00000548126 CREB5Q02930 508 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 UAP1L1Q3KQV9 507 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 PLK5Q496M5 336 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 DGKKQ5KSL6 1271 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 PPM1LQ5SGD2 360 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 FAM160B1Q5W0V3 765 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 TWF2Q6IBS0 349 aaKnown RBP7.46□□□□□ -1.22
CCDC59-203ENST00000548126 EFCAB12Q6NXP0 572 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 PAQR3Q6TCH7 311 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 TBC1D10CQ8IV04 446 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 PGBD4Q96DM1 585 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 MAP7D2Q96T17 732 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 SDF4Q9BRK5 362 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 KCNH7Q9NS40 1196 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 RBM12Q9NTZ6 932 aaKnown RBP7.46□□□□□ -1.22
CCDC59-203ENST00000548126 AP5S1Q9NUS5 200 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 MARCH5Q9NX47 278 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 UBP1Q9NZI7 540 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 SUSD2Q9UGT4 822 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 FBXW11Q9UKB1 542 aa7.46□□□□□ -1.22
CCDC59-203ENST00000548126 ABCA7Q8IZY2 2146 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 PLXNB3Q9ULL4 1909 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 SPAARA0A1B0GVQ0 90 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 CSDE1O75534 798 aaKnown RBP7.45□□□□□ -1.22
CCDC59-203ENST00000548126 RHOBTB1O94844 696 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 POU2F2P09086 479 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 MSL3P1P0C860 447 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 RPL17P18621 184 aaKnown RBP7.45□□□□□ -1.22
CCDC59-203ENST00000548126 PXNP49023 591 aaPredicted RBP7.45□□□□□ -1.22
CCDC59-203ENST00000548126 RAB27AP51159 221 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 CLCN3P51790 818 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 CREMQ03060 361 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 AUHQ13825 339 aaKnown RBP7.45□□□□□ -1.22
CCDC59-203ENST00000548126 ELF2Q15723 593 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 SLC35G1Q2M3R5 365 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 USP41Q3LFD5 358 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 PABPC1LQ4VXU2 614 aaKnown RBP7.45□□□□□ -1.22
CCDC59-203ENST00000548126 LIN9Q5TKA1 542 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 C1orf228Q6PIY5 440 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 ABHD15Q6UXT9 468 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 CYP2R1Q6VVX0 501 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 Q6ZS52 159 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 ZNF843Q8N446 348 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 LINC01465Q8N7H1 131 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 LSM14AQ8ND56 463 aaKnown RBP7.45□□□□□ -1.22
CCDC59-203ENST00000548126 ING5Q8WYH8 240 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 SEC16BQ96JE7 1060 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 ZNF668Q96K58 619 aaPredicted RBP7.45□□□□□ -1.22
CCDC59-203ENST00000548126 DHRS1Q96LJ7 313 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 JMJD8Q96S16 334 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 RNF38Q9H0F5 515 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 ZFP14Q9HCL3 533 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 HCFC1R1Q9NWW0 138 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 DNMT3BQ9UBC3 853 aaKnown RBP7.45□□□□□ -1.22
CCDC59-203ENST00000548126 STRIP2Q9ULQ0 834 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 PRG3Q9Y2Y8 225 aaPredicted RBP7.45□□□□□ -1.22
CCDC59-203ENST00000548126 MRPS23Q9Y3D9 190 aaKnown RBP7.45□□□□□ -1.22
CCDC59-203ENST00000548126 PTPN13Q12923 2485 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 NEDD4P46934 1319 aa7.45□□□□□ -1.22
CCDC59-203ENST00000548126 PDCD11Q14690 1871 aaKnown RBP7.45□□□□□ -1.22
CCDC59-203ENST00000548126 COL4A2P08572 1712 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 ATG2BQ96BY7 2078 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 CYTH3O43739 400 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 EXTL3O43909 919 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 POMCP01189 267 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 GDI1P31150 447 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 OR1G1P47890 313 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 LIMS1P48059 325 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 GPC3P51654 580 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 SRSF1Q07955 248 aaKnown RBP eCLIP7.44□□□□□ -1.22
CCDC59-203ENST00000548126 SWSAP1Q6NVH7 229 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 CRTC3Q6UUV7 619 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 CENPQQ7L2Z9 268 aaPredicted RBP7.44□□□□□ -1.22
CCDC59-203ENST00000548126 CCDC60Q8IWA6 550 aaPredicted RBP7.44□□□□□ -1.22
CCDC59-203ENST00000548126 CKAP2LQ8IYA6 745 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 COLGALT2Q8IYK4 626 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 SYNPOQ8N3V7 929 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 MDM1Q8TC05 714 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 MSANTD3Q96H12 275 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 B3GALT6Q96L58 329 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 SCLT1Q96NL6 688 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 FERD3LQ96RJ6 166 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 CLMPQ9H6B4 373 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 ZNF302Q9NR11 478 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 HELLSQ9NRZ9 838 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 PCDHB2Q9Y5E7 798 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 PMF1-BGLAPU3KQ54 211 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 ZMYM6O95789 1325 aa7.44□□□□□ -1.22
CCDC59-203ENST00000548126 PI4KAP42356 2102 aa7.43□□□□□ -1.22
CCDC59-203ENST00000548126 ATMQ13315 3056 aa7.43□□□□□ -1.22
CCDC59-203ENST00000548126 MEFVO15553 781 aaPredicted RBP7.43□□□□□ -1.22
CCDC59-203ENST00000548126 CCNE2O96020 404 aa7.43□□□□□ -1.22
CCDC59-203ENST00000548126 PSMC3P17980 439 aa7.43□□□□□ -1.22
CCDC59-203ENST00000548126 FCARP24071 287 aa7.43□□□□□ -1.22
CCDC59-203ENST00000548126 CTSKP43235 329 aa7.43□□□□□ -1.22
CCDC59-203ENST00000548126 IRX4P78413 519 aa7.43□□□□□ -1.22
CCDC59-203ENST00000548126 CDC42EP1Q00587 391 aa7.43□□□□□ -1.22
CCDC59-203ENST00000548126 ITGB3BPQ13352 177 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms