RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 LRRC53A6NM62 1247 aa19.72■□□□□ 0.75
VPS33A-205ENST00000541169 PSMC3P17980 439 aa19.72■□□□□ 0.75
VPS33A-205ENST00000541169 ATP5C1P36542 298 aaKnown RBP19.72■□□□□ 0.75
VPS33A-205ENST00000541169 PDCLQ13371 301 aa19.72■□□□□ 0.75
VPS33A-205ENST00000541169 PARM1Q6UWI2 310 aa19.72■□□□□ 0.75
VPS33A-205ENST00000541169 VSTM4Q8IW00 320 aa19.72■□□□□ 0.75
VPS33A-205ENST00000541169 MFSD6LQ8IWD5 586 aa19.72■□□□□ 0.75
VPS33A-205ENST00000541169 C1orf131Q8NDD1 294 aaKnown RBP19.72■□□□□ 0.75
VPS33A-205ENST00000541169 PPP1R13BQ96KQ4 1090 aa19.72■□□□□ 0.75
VPS33A-205ENST00000541169 ULBP1Q9BZM6 244 aa19.72■□□□□ 0.75
VPS33A-205ENST00000541169 ABCC13Q9NSE7 274 aa19.72■□□□□ 0.75
VPS33A-205ENST00000541169 NAGPAQ9UK23 515 aa19.72■□□□□ 0.75
VPS33A-205ENST00000541169 MYO16Q9Y6X6 1858 aa19.72■□□□□ 0.75
VPS33A-205ENST00000541169 UNC80Q8N2C7 3258 aa19.72■□□□□ 0.75
VPS33A-205ENST00000541169 C2orf78A6NCI8 922 aa19.71■□□□□ 0.75
VPS33A-205ENST00000541169 TULP2O00295 520 aa19.71■□□□□ 0.75
VPS33A-205ENST00000541169 TLR5O60602 858 aa19.71■□□□□ 0.75
VPS33A-205ENST00000541169 GLI1P08151 1106 aa19.71■□□□□ 0.75
VPS33A-205ENST00000541169 PRKCIP41743 596 aa19.71■□□□□ 0.75
VPS33A-205ENST00000541169 DAOAP59103 153 aa19.71■□□□□ 0.75
VPS33A-205ENST00000541169 YWHAGP61981 247 aaKnown RBP eCLIP19.71■□□□□ 0.75
VPS33A-205ENST00000541169 PFKPQ01813 784 aa19.71■□□□□ 0.75
VPS33A-205ENST00000541169 ASIC2Q16515 512 aa19.71■□□□□ 0.75
VPS33A-205ENST00000541169 TSR1Q2NL82 804 aaKnown RBP19.71■□□□□ 0.75
VPS33A-205ENST00000541169 STXBP5Q5T5C0 1151 aa19.71■□□□□ 0.75
VPS33A-205ENST00000541169 IRF2BP2Q7Z5L9 587 aa19.71■□□□□ 0.75
VPS33A-205ENST00000541169 DRC7Q8IY82 874 aa19.71■□□□□ 0.75
VPS33A-205ENST00000541169 SLC44A3Q8N4M1 653 aa19.71■□□□□ 0.75
VPS33A-205ENST00000541169 FGF14Q92915 247 aa19.71■□□□□ 0.75
VPS33A-205ENST00000541169 SYNCQ9H7C4 482 aa19.71■□□□□ 0.75
VPS33A-205ENST00000541169 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.71■□□□□ 0.75
VPS33A-205ENST00000541169 DNMT3LQ9UJW3 386 aa19.71■□□□□ 0.75
VPS33A-205ENST00000541169 CALCAP01258 141 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 SRFP11831 508 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 LCP1P13796 627 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 FCARP24071 287 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 SCNN1AP37088 669 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 RGS7P49802 495 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 ARID5AQ03989 594 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 FCHO2Q0JRZ9 810 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 ARHGAP29Q52LW3 1261 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 EFHC1Q5JVL4 640 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 BTBD8Q5XKL5 378 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 TOGARAM2Q6ZUX3 1019 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 RSRC2Q7L4I2 434 aaKnown RBP19.7■□□□□ 0.74
VPS33A-205ENST00000541169 VPS36Q86VN1 386 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 ERICH1Q86X53 443 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 GAS2L3Q86XJ1 694 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 YAF2Q8IY57 180 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 ARL14EPQ8N8R7 260 aaPredicted RBP19.7■□□□□ 0.74
VPS33A-205ENST00000541169 BPIFB1Q8TDL5 484 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 MRFAP1L1Q96HT8 127 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 AGPAT1Q99943 283 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 TRMT61BQ9BVS5 477 aaKnown RBP19.7■□□□□ 0.74
VPS33A-205ENST00000541169 TRPV5Q9NQA5 729 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 SLC2A4RGQ9NR83 387 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 ASNSD1Q9NWL6 643 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 STRIP2Q9ULQ0 834 aa19.7■□□□□ 0.74
VPS33A-205ENST00000541169 A0A1W2PQH9 124 aa19.69■□□□□ 0.74
VPS33A-205ENST00000541169 TNFRSF10AO00220 468 aa19.69■□□□□ 0.74
VPS33A-205ENST00000541169 COCHO43405 550 aa19.69■□□□□ 0.74
VPS33A-205ENST00000541169 DCXO43602 365 aa19.69■□□□□ 0.74
VPS33A-205ENST00000541169 CYP1A1P04798 512 aaPredicted RBP19.69■□□□□ 0.74
VPS33A-205ENST00000541169 MMEP08473 750 aa19.69■□□□□ 0.74
VPS33A-205ENST00000541169 RARGP13631 454 aa19.69■□□□□ 0.74
VPS33A-205ENST00000541169 KPNA1P52294 538 aaPredicted RBP19.69■□□□□ 0.74
VPS33A-205ENST00000541169 COG7P83436 770 aa19.69■□□□□ 0.74
VPS33A-205ENST00000541169 KLHL30Q0D2K2 578 aa19.69■□□□□ 0.74
VPS33A-205ENST00000541169 TAF3Q5VWG9 929 aa19.69■□□□□ 0.74
VPS33A-205ENST00000541169 TANGO2Q6ICL3 276 aa19.69■□□□□ 0.74
VPS33A-205ENST00000541169 CC2D1AQ6P1N0 951 aaPredicted RBP19.69■□□□□ 0.74
VPS33A-205ENST00000541169 WDTC1Q8N5D0 677 aa19.69■□□□□ 0.74
VPS33A-205ENST00000541169 RNF139Q8WU17 664 aa19.69■□□□□ 0.74
VPS33A-205ENST00000541169 IRF7Q92985 503 aa19.69■□□□□ 0.74
VPS33A-205ENST00000541169 USP13Q92995 863 aaPredicted RBP19.69■□□□□ 0.74
VPS33A-205ENST00000541169 C18orf8Q96DM3 657 aa19.69■□□□□ 0.74
VPS33A-205ENST00000541169 NECAB3Q96P71 396 aaPredicted RBP19.69■□□□□ 0.74
VPS33A-205ENST00000541169 DUSP12Q9UNI6 340 aa19.69■□□□□ 0.74
VPS33A-205ENST00000541169 HEPACAM2A8MVW5 462 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 E5RJQ4 531 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 NRG2O14511 850 aaPredicted RBP19.68■□□□□ 0.74
VPS33A-205ENST00000541169 SLC9A3R1O14745 358 aaPredicted RBP19.68■□□□□ 0.74
VPS33A-205ENST00000541169 CHADO15335 359 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 LTFP02788 710 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 GYPCP04921 128 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 MBL2P11226 248 aaPredicted RBP19.68■□□□□ 0.74
VPS33A-205ENST00000541169 NSFP46459 744 aaKnown RBP19.68■□□□□ 0.74
VPS33A-205ENST00000541169 GABRB2P47870 512 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 NOMO3P69849 1222 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 FMO1Q01740 532 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 C10orf120Q5SQS8 335 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 BSPRYQ5W0U4 402 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 SCD5Q86SK9 330 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 PASD1Q8IV76 773 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 CNGA4Q8IV77 575 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 SCUBE3Q8IX30 993 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 OR8K1Q8NGG5 319 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 DNASE1L2Q92874 299 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 CPXM1Q96SM3 734 aa19.68■□□□□ 0.74
VPS33A-205ENST00000541169 CD320Q9NPF0 282 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms