RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 PTPN7P35236 360 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 IREB2P48200 963 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 RNF219Q5W0B1 726 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 AAGABQ6PD74 315 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 IPMKQ8NFU5 416 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 USP33Q8TEY7 942 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 SLC20A1Q8WUM9 679 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 COQ7Q99807 217 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 DDX50Q9BQ39 737 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 RMND5AQ9H871 391 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 AFF4Q9UHB7 1163 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 AAR2Q9Y312 384 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 PKP3Q9Y446 797 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 SLC30A1Q9Y6M5 507 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 SLIT1O75093 1534 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 CD4P01730 458 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 MAPTP10636 758 aaKnown RBP15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 GTF2H3Q13889 308 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 PKN1Q16512 942 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 FBXO33Q7Z6M2 555 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 CCDC33Q8N5R6 958 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 SETD9Q8NE22 299 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 LRRC39Q96DD0 335 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 KIAA1683Q9H0B3 1180 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 ITGA9Q13797 1035 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 GOLGA7BQ2TAP0 167 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 FAXCQ5TGI0 409 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 SPATA33Q96N06 139 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 COMMD8Q9NX08 183 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 ADAM30Q9UKF2 790 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 DDX3XO00571 662 aaKnown RBP eCLIP15.43■□□□□ 0.062e-25■□□□□ 10.8
SMARCA4-207ENST00000541122 TRDMT1O14717 391 aaKnown RBP15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 TFRCP02786 760 aaKnown RBP15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 NOP9Q86U38 636 aaKnown RBP15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 LENG1Q96BZ8 264 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 C19orf60Q96EN9 201 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 HES6Q96HZ4 224 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 GANQ9H2C0 597 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 TJP2Q9UDY2 1190 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 RAD54BQ9Y620 910 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 PRKCEQ02156 737 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 RGS21Q2M5E4 152 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 SAMD4BQ5PRF9 694 aaKnown RBP15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 TCHHL1Q5QJ38 904 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 UGT3A1Q6NUS8 523 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 DENND5BQ6ZUT9 1274 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.43■□□□□ 0.061e-5■■□□□ 13.3
SMARCA4-207ENST00000541122 SLC5A5Q92911 643 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 TADA1Q96BN2 335 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 DCUN1D5Q9BTE7 237 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 GRIP2Q9C0E4 1043 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 DRG1Q9Y295 367 aaKnown RBP15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 ADGRA2Q96PE1 1338 aa15.43■□□□□ 0.06
SMARCA4-207ENST00000541122 BNIP3LO60238 219 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 TRIM13O60858 407 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 EIF2S1P05198 315 aaKnown RBP15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 PDK4Q16654 411 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 FAM98BQ52LJ0 330 aaKnown RBP15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 ARMC4Q5T2S8 1044 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 N4BP2L1Q5TBK1 243 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 MCOLN2Q8IZK6 566 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 CEP44Q9C0F1 390 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 RAD21L1Q9H4I0 556 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 MAGEB16A2A368 324 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 UBE2Q2LH0YL09 131 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 CYTH3O43739 400 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 GRAP2O75791 330 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 RHOBTB1O94844 696 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 PPP4CP60510 307 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 PDIA6Q15084 440 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 AGKQ53H12 422 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 GRTP1Q5TC63 336 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 ANKS3Q6ZW76 656 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 STRA8Q7Z7C7 330 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 DHDDSQ86SQ9 333 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 TLK2Q86UE8 772 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 DHRSXQ8N5I4 330 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 ACTL9Q8TC94 416 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 AFG1LQ8WV93 481 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 ACSF2Q96CM8 615 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 SGF29Q96ES7 293 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 UBAP1Q9NZ09 502 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 AFF2P51816 1311 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 PTPRMP28827 1452 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 SPDYE5A6NIY4 337 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 OPLAHO14841 1288 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 ZNF862O60290 1169 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 ECE2O60344 883 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 LDLRP01130 860 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 PDK3Q15120 406 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 SPDYE7PQ495Y7 208 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 MRNIPQ6NTE8 343 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 ZNF720Q7Z2F6 126 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 FNIP1Q8TF40 1166 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 KCTD14Q9BQ13 255 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 INTS13Q9NVM9 706 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 POLRMTO00411 1230 aaKnown RBP15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 MYBL2P10244 700 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 GP5P40197 560 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 ELK3P41970 407 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms