RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 GATA6Q92908 595 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 CALN1Q9BXU9 219 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 NMUR2Q9GZQ4 415 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 CYP3A43Q9HB55 503 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 PAPOLBQ9NRJ5 636 aaKnown RBP13.79□□□□□ -0.2
UBE3B-209ENST00000539584 METTL5Q9NRN9 209 aaKnown RBP13.79□□□□□ -0.2
UBE3B-209ENST00000539584 DLGAP2Q9P1A6 1054 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 MYH9P35579 1960 aaKnown RBP13.79□□□□□ -0.2
UBE3B-209ENST00000539584 EDN1P05305 212 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 DESP17661 470 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 OSBPP22059 807 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 ATICP31939 592 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 TNFSF9P41273 254 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 ACTR3P61158 418 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 TMPRSS15P98073 1019 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 TFAMQ00059 246 aaKnown RBP13.78□□□□□ -0.2
UBE3B-209ENST00000539584 RBBP5Q15291 538 aaKnown RBP13.78□□□□□ -0.2
UBE3B-209ENST00000539584 OR52E8Q6IFG1 317 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 GALNT15Q8N3T1 639 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 ZNF280CQ8ND82 737 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 NRG4Q8WWG1 115 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 IFT43Q96FT9 208 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 RNF157Q96PX1 679 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 CPXM1Q96SM3 734 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 TBCBQ99426 244 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 GCOM2Q9BZD3 368 aaPredicted RBP13.78□□□□□ -0.2
UBE3B-209ENST00000539584 VRTNQ9H8Y1 702 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 ZC3H7BQ9UGR2 993 aaKnown RBP13.78□□□□□ -0.2
UBE3B-209ENST00000539584 KIAA1257Q9ULG3 409 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 TTLL3Q9Y4R7 772 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 KIAA1217Q5T5P2 1943 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 FAM237BA0A1B0GVD1 139 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 SNNO75324 88 aaPredicted RBP13.78□□□□□ -0.2
UBE3B-209ENST00000539584 APOEP02649 317 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 CD48P09326 243 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 TGFB3P10600 412 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 HARSP12081 509 aaKnown RBP13.78□□□□□ -0.2
UBE3B-209ENST00000539584 P4HA1P13674 534 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 GPD1P21695 349 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 PROZP22891 400 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 SESN3P58005 492 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 YWHAZP63104 245 aaKnown RBP13.78□□□□□ -0.2
UBE3B-209ENST00000539584 SP2Q02086 613 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 THOC5Q13769 683 aaKnown RBP13.78□□□□□ -0.2
UBE3B-209ENST00000539584 TMCO4Q5TGY1 634 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 MPZL3Q6UWV2 235 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 TSHZ1Q6ZSZ6 1077 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 NUDCD3Q8IVD9 361 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 CHST13Q8NET6 341 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 ACMSDQ8TDX5 336 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 WDR60Q8WVS4 1066 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 HSPH1Q92598 858 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 ADPGKQ9BRR6 497 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 SDCBP2Q9H190 292 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 USP29Q9HBJ7 922 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 ALG13Q9NP73 1137 aaKnown RBP13.78□□□□□ -0.2
UBE3B-209ENST00000539584 RAB6BQ9NRW1 208 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 THAP1Q9NVV9 213 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 HOXC10Q9NYD6 342 aa13.78□□□□□ -0.2
UBE3B-209ENST00000539584 H7C0C1 242 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 RFPL1O75677 317 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 APBA3O96018 575 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 PRKCBP05771 671 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 VDRP11473 427 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 MYL4P12829 197 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 AOC1P19801 751 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 ATP5OP48047 213 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 STAT5BP51692 787 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 CDH6P55285 790 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 SH3BGRP55822 239 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-209ENST00000539584 PTPN11Q06124 597 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-209ENST00000539584 BST1Q10588 318 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 TEX44Q53QW1 395 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 MYLK4Q86YV6 388 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-209ENST00000539584 WDR75Q8IWA0 830 aaKnown RBP13.77□□□□□ -0.21
UBE3B-209ENST00000539584 CTAGE3PQ8IX95 158 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 PPM1NQ8N819 430 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 SPDYE1Q8NFV5 336 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-209ENST00000539584 AFG1LQ8WV93 481 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 PRPF31Q8WWY3 499 aaKnown RBP13.77□□□□□ -0.21
UBE3B-209ENST00000539584 FAM161BQ96MY7 647 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 IFT122Q9HBG6 1241 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 POPDC2Q9HBU9 364 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 ARHGEF4Q9NR80 690 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 IL1RAPL1Q9NZN1 696 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 PCSK1NQ9UHG2 260 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 CYTH4Q9UIA0 394 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 PLA2G4CQ9UP65 541 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 PARP14Q460N5 1801 aa13.77□□□□□ -0.21
UBE3B-209ENST00000539584 H3BRJ5 948 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 PRPSAP2O60256 369 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 KLHL2O95198 593 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 ERBB2P04626 1255 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 CRABP2P29373 138 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 MAGEA3P43357 314 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 GCLCP48506 637 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-209ENST00000539584 SARNPP82979 210 aaKnown RBP13.76□□□□□ -0.21
UBE3B-209ENST00000539584 TMEM132BQ14DG7 1078 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 STILQ15468 1287 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 SEZ6Q53EL9 994 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms