RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 ICAM1P05362 532 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 SSBP05455 408 aaKnown RBP eCLIP4.53□□□□□ -1.68
YBX3-205ENST00000536107 ALDH7A1P49419 539 aaKnown RBP4.53□□□□□ -1.68
YBX3-205ENST00000536107 MRPS6P82932 125 aaKnown RBP4.53□□□□□ -1.68
YBX3-205ENST00000536107 ATP8B2P98198 1209 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 GRIN1Q05586 938 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 STXBP2Q15833 593 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 TMEM266Q2M3C6 531 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 HSDL1Q3SXM5 330 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 UTP14CQ5TAP6 766 aaKnown RBP4.53□□□□□ -1.68
YBX3-205ENST00000536107 C12orf60Q5U649 245 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 TAF2Q6P1X5 1199 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 KCTD1Q719H9 257 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 MTSS1LQ765P7 747 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 ZNF444Q8N0Y2 327 aaPredicted RBP4.53□□□□□ -1.68
YBX3-205ENST00000536107 LRRC43Q8N309 656 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 GMCL1P1Q8NEA9 526 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 DNAJB3Q8WWF6 145 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 CFHR4Q92496 578 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 FGF14Q92915 247 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 KXD1Q9BQD3 176 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 TRAIPQ9BWF2 469 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 FAM49AQ9H0Q0 323 aaPredicted RBP4.53□□□□□ -1.68
YBX3-205ENST00000536107 NELFAQ9H3P2 528 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 RIOX1Q9H6W3 641 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 ARMT1Q9H993 441 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 MAN1C1Q9NR34 630 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 HEBP1Q9NRV9 189 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 ANKMY1Q9P2S6 941 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 ZNF215Q9UL58 517 aaPredicted RBP4.53□□□□□ -1.68
YBX3-205ENST00000536107 PCDHA2Q9Y5H9 948 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 NOTCH2Q04721 2471 aa4.53□□□□□ -1.68
YBX3-205ENST00000536107 FANCIQ9NVI1 1328 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 LNP1A1A4G5 178 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 ZNF839A8K0R7 811 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 PRKAB2O43741 272 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 RFPL2O75678 378 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 EIF3JO75822 258 aaKnown RBP4.52□□□□□ -1.69
YBX3-205ENST00000536107 GGPS1O95749 300 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 TTLL1O95922 423 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 LGALS2P05162 132 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 CDK4P11802 303 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 CD38P28907 300 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 ETV4P43268 484 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 PXNP49023 591 aaPredicted RBP4.52□□□□□ -1.69
YBX3-205ENST00000536107 ZNF143P52747 638 aaPredicted RBP4.52□□□□□ -1.69
YBX3-205ENST00000536107 RRADP55042 308 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 SLC25A3Q00325 362 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 MGAT3Q09327 533 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 OS9Q13438 667 aaPredicted RBP4.52□□□□□ -1.69
YBX3-205ENST00000536107 WTAPQ15007 396 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 ELF2Q15723 593 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 CCDC96Q2M329 555 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 CELF3Q5SZQ8 465 aaKnown RBP4.52□□□□□ -1.69
YBX3-205ENST00000536107 SLC9C2Q5TAH2 1124 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 ARHGEF16Q5VV41 709 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 CD276Q5ZPR3 534 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 CYP26C1Q6V0L0 522 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 SLC24A5Q71RS6 500 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 WDR5BQ86VZ2 330 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 LCORLQ8N3X6 602 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 SPEM1Q8N4L4 309 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 RNF169Q8NCN4 708 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 CMASQ8NFW8 434 aaPredicted RBP4.52□□□□□ -1.69
YBX3-205ENST00000536107 NSUN6Q8TEA1 469 aaKnown RBP4.52□□□□□ -1.69
YBX3-205ENST00000536107 LMBR1Q8WVP7 490 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 GAB3Q8WWW8 586 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 ADAM2Q99965 735 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 TACO1Q9BSH4 297 aaKnown RBP4.52□□□□□ -1.69
YBX3-205ENST00000536107 C16orf70Q9BSU1 422 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 PHF20Q9BVI0 1012 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 TMEM117Q9H0C3 514 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 C1orf112Q9NSG2 853 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 IL17BQ9UHF5 180 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 DPP7Q9UHL4 492 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 GINS2Q9Y248 185 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 ZFP37Q9Y6Q3 630 aaPredicted RBP4.52□□□□□ -1.69
YBX3-205ENST00000536107 CFAP46Q8IYW2 2715 aa4.52□□□□□ -1.69
YBX3-205ENST00000536107 CCDC171Q6TFL3 1326 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 UBR5O95071 2799 aaPredicted RBP4.51□□□□□ -1.69
YBX3-205ENST00000536107 COL12A1Q99715 3063 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 A0A087WV48 116 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 ESYT3A0FGR9 886 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 CAPN14A8MX76 684 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 SLC27A2O14975 620 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 RHOBTB1O94844 696 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 SCG5P05408 212 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 SPATA31D3P0C874 917 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 CTSAP10619 480 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 NAT2P11245 290 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 MYCLP12524 364 aaPredicted RBP4.51□□□□□ -1.69
YBX3-205ENST00000536107 ZNF37AP17032 561 aaPredicted RBP4.51□□□□□ -1.69
YBX3-205ENST00000536107 HOXC8P31273 242 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 HOXC12P31275 282 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 SLC16A2P36021 539 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 CLCN4P51793 760 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 POLGP54098 1239 aaPredicted RBP4.51□□□□□ -1.69
YBX3-205ENST00000536107 ATXN3P54252 364 aaPredicted RBP4.51□□□□□ -1.69
YBX3-205ENST00000536107 IGBP1P78318 339 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 PPFIA1Q13136 1202 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms