RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 NEUROG2Q9H2A3 272 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 UNC45AQ9H3U1 944 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ECT2Q9H8V3 914 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 MLXIPQ9HAP2 919 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 GOLGA2P5Q9HBQ8 144 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ARHGEF3Q9NR81 526 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ECHDC1Q9NTX5 307 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 RBM12Q9NTZ6 932 aaKnown RBP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ABHD10Q9NUJ1 306 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ETNK2Q9NVF9 386 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 RHBDL2Q9NX52 303 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ZIM2Q9NZV7 527 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 DLGAP2Q9P1A6 1054 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 NFU1Q9UMS0 254 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 SNX12Q9UMY4 172 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 WDR37Q9Y2I8 494 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 TBC1D30Q9Y2I9 924 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 PCDHGA2Q9Y5H1 932 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 CDY2AQ9Y6F7 541 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 PTPRUQ92729 1446 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 TNKSO95271 1327 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 AFF2P51816 1311 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ITIH6Q6UXX5 1313 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 PREX2Q70Z35 1606 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ARHGEF10O15013 1369 aa3.4□□□□□ -1.86
CSDE1-216ENST00000534389 PALLDQ8WX93 1383 aa3.4□□□□□ -1.86
CSDE1-216ENST00000534389 A0A0A6YYJ9 748 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 A0A0J9YVX5 310 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 GOLGA6L10A6NI86 522 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 ZNF609O15014 1411 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 ASAP2O43150 1006 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 CDC14BO60729 498 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 USO1O60763 962 aaKnown RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 SUPT3HO75486 399 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 KLHL18O94889 574 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 CYP21A2P08686 494 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 ZNF888P0CJ79 500 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 TPBGLP0DKB5 382 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 MYL6BP14649 208 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 HNRNPLP14866 589 aaKnown RBP eCLIP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 ALOX15P16050 662 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 CFPP27918 469 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 CASP1P29466 404 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 KRT9P35527 623 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 PCK1P35558 622 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 HSD17B3P37058 310 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 MATR3P43243 847 aaKnown RBP eCLIP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 COPB1P53618 953 aaKnown RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 HDAC4P56524 1084 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 MRPS35P82673 323 aaKnown RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 CAP1Q01518 475 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 GUCY2DQ02846 1103 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 CYP4A11Q02928 519 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 MST1RQ04912 1400 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 DUSP2Q05923 314 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 SULT2A1Q06520 285 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 MCL1Q07820 350 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 TOP3AQ13472 1001 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 TCIRG1Q13488 830 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 PIN1Q13526 163 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 TRIM25Q14258 630 aaKnown RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 EIF4HQ15056 248 aaKnown RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 KRT31Q15323 416 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 SURF1Q15526 300 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 HLFQ16534 295 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 CLPPQ16740 277 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 MUM1Q2TAK8 710 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 KBTBD12Q3ZCT8 623 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 CERKLQ49MI3 558 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 SMUG1Q53HV7 270 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 EPHA10Q5JZY3 1008 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 CCDC122Q5T0U0 273 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 UBXN11Q5T124 520 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 AGBL4Q5VU57 503 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 DAB2IPQ5VWQ8 1189 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 TMEM200BQ69YZ2 307 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 IRGCQ6NXR0 463 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 NFRKBQ6P4R8 1299 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 SYNE3Q6ZMZ3 975 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 NCCRP1Q6ZVX7 275 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 USP49Q70CQ1 688 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 PTF1AQ7RTS3 328 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 TRPM8Q7Z2W7 1104 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 KANSL1Q7Z3B3 1105 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 APBB1IPQ7Z5R6 666 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 SESTD1Q86VW0 696 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 LONP2Q86WA8 852 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 CHPFQ8IZ52 775 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 OR5M3Q8NGP4 307 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 TTC8Q8TAM2 541 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 SPATA20Q8TB22 786 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 CAGE1Q8TC20 777 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 MIPOL1Q8TD10 442 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 ATP8B4Q8TF62 1192 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 NRG4Q8WWG1 115 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 LPPQ93052 612 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 CENPTQ96BT3 561 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 OPTNQ96CV9 577 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 SLC7A6OSQ96CW6 309 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 PBKQ96KB5 322 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms