RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 LEFTY2O00292 366 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 FOXN3O00409 490 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 NRG2O14511 850 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 CAPN9O14815 690 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 NCAM2O15394 837 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 COCHO43405 550 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 CBFA2T2O43439 604 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 NFATC1O95644 943 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 LSM8O95777 96 aaKnown RBP5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 ADH1CP00326 375 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 TPM1P09493 284 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 IRF1P10914 325 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 RARGP13631 454 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 GLULP15104 373 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 TCF3P15923 654 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 SOX5P35711 763 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 RGS7P49802 495 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 SLC7A9P82251 487 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 COG7P83436 770 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 KCNMA1Q12791 1236 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 USP4Q13107 963 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 UBXN2BQ14CS0 331 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 IQCB1Q15051 598 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZNF77Q15935 545 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 ITPRIPL2Q3MIP1 535 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 SLC44A4Q53GD3 710 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 RAB41Q5JT25 222 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 SNX30Q5VWJ9 437 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 KLHDC10Q6PID8 442 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 LRSAM1Q6UWE0 723 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 TRIM72Q6ZMU5 477 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 TOGARAM2Q6ZUX3 1019 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 BMP8AQ7Z5Y6 402 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 SLC47A2Q86VL8 602 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZNF677Q86XU0 584 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 GPIHBP1Q8IV16 184 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 PASD1Q8IV76 773 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 FAM71AQ8IYT1 594 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 SCML4Q8N228 414 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 TMEM35BQ8NCS4 154 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZNF397Q8NF99 534 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 STK32AQ8WU08 396 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 OSCP1Q8WVF1 389 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZNF606Q8WXB4 792 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 IRGQQ8WZA9 623 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 FAM149B1Q96BN6 582 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 IQCDQ96DY2 449 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 CYP2S1Q96SQ9 504 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 NELL2Q99435 816 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 ANP32EQ9BTT0 268 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 RPP25Q9BUL9 199 aaKnown RBP5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 PLA2G2FQ9BZM2 168 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 GANQ9H2C0 597 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 SMOC2Q9H3U7 446 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 CCSER2Q9H7U1 834 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 TBC1D17Q9HA65 648 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 NLRC4Q9NPP4 1024 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 CYLDQ9NQC7 956 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 GKN1Q9NS71 199 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 ABCC13Q9NSE7 274 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 SEPT11Q9NVA2 429 aaKnown RBP5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 CFAP97Q9P2B7 532 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 TBC1D14Q9P2M4 693 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 RASAL2Q9UJF2 1139 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 PCDHGC3Q9UN70 934 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 CCL26Q9Y258 94 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 SIK3Q9Y2K2 1263 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 USP3Q9Y6I4 520 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 PIAS3Q9Y6X2 628 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 KANSL1LA0AUZ9 987 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 TULP2O00295 520 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 PIK3R2O00459 728 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 GFPT2O94808 682 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 OLFM2O95897 454 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 LTFP02788 710 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZDHHC11BP0C7U3 371 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 PNMA6AP0CW24 399 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 CYP11B1P15538 503 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 FERP16591 822 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 MAGEA9P43362 315 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 HARS2P49590 506 aaKnown RBP5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 KLK7P49862 253 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 CLCN5P51795 746 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 MLLT6P55198 1093 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 UBASH3AP57075 661 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 DAOAP59103 153 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 FANCCQ00597 558 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 ARID5AQ03989 594 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 EFEMP1Q12805 493 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 PDCLQ13371 301 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 RUNX3Q13761 415 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 LRRC32Q14392 662 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 PREPLQ4J6C6 727 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 PKDCCQ504Y2 493 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 TAF3Q5VWG9 929 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 BSPRYQ5W0U4 402 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 PM20D1Q6GTS8 502 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 ASTLQ6HA08 431 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 PPP1R2P3Q6NXS1 205 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 PMF1Q6P1K2 205 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms