RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 SLC47A2Q86VL8 602 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 KIAA2013Q8IYS2 634 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 IL1RAPL1Q9NZN1 696 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 MYPNQ86TC9 1320 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 H3BRB1 525 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 CTSEP14091 401 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 HERVK_113P62684 666 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 RPL10AP62906 217 aaKnown RBP10.83□□□□□ -0.68
CTSC-203ENST00000524463 CACHD1Q5VU97 1274 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 OVOS1Q6IE37 1185 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 INTS5Q6P9B9 1019 aaKnown RBP10.83□□□□□ -0.68
CTSC-203ENST00000524463 MOB2Q70IA6 237 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 KRT35Q92764 455 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 HMX1Q9NP08 348 aaPredicted RBP10.83□□□□□ -0.68
CTSC-203ENST00000524463 STOML1Q9UBI4 398 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 AP3B1O00203 1094 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 SRGNP10124 158 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 OR1E1P30953 314 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 GCLCP48506 637 aaPredicted RBP10.83□□□□□ -0.68
CTSC-203ENST00000524463 NCKAP1LP55160 1127 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 LAMB3Q13751 1172 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 KLHDC7AQ5VTJ3 777 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 C11orf63Q6NUN7 778 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 PARP9Q8IXQ6 854 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 SPATC1LQ9H0A9 340 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 MROH8Q9H579 483 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 SPG21Q9NZD8 308 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 E9PBE3 544 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 ATP5HO75947 161 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 CTNNB1P35222 781 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 FLCNQ8NFG4 579 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 GPR152Q8TDT2 470 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 P2RX7Q99572 595 aaKnown RBP10.83□□□□□ -0.68
CTSC-203ENST00000524463 MANSC1Q9H8J5 431 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 SH3BP4Q9P0V3 963 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 SNX12Q9UMY4 172 aa10.83□□□□□ -0.68
CTSC-203ENST00000524463 RASSF10A6NK89 507 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 HOXA2O43364 376 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 DAB1O75553 588 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 CALCAP01258 141 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 IL1R1P14778 569 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 HIRAP54198 1017 aaPredicted RBP10.82□□□□□ -0.68
CTSC-203ENST00000524463 SFSWAPQ12872 951 aaKnown RBP10.82□□□□□ -0.68
CTSC-203ENST00000524463 FAM83EQ2M2I3 478 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 USP39Q53GS9 565 aaKnown RBP10.82□□□□□ -0.68
CTSC-203ENST00000524463 CEP78Q5JTW2 689 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 CBWD3Q5JTY5 395 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 CBWD5Q5RIA9 395 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 CAPRIN2Q6IMN6 1127 aaKnown RBP10.82□□□□□ -0.68
CTSC-203ENST00000524463 ACAD10Q6JQN1 1059 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 C16orf89Q6UX73 402 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 ITIH5Q86UX2 942 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 PHF21BQ96EK2 531 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 RIT2Q99578 217 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 OMDQ99983 421 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 BPIFA3Q9BQP9 254 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 CORO1BQ9BR76 489 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 TMEM121Q9BTD3 319 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 FHDC1Q9C0D6 1143 aaPredicted RBP10.82□□□□□ -0.68
CTSC-203ENST00000524463 ROGDIQ9GZN7 287 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 PDGFCQ9NRA1 345 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 CHURC1-FNTBB4DL54 471 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 FOXN3O00409 490 aaPredicted RBP10.82□□□□□ -0.68
CTSC-203ENST00000524463 SNRPAP09012 282 aaKnown RBP10.82□□□□□ -0.68
CTSC-203ENST00000524463 SLC2A3P11169 496 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 CNTN2Q02246 1040 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 DENND1BQ6P3S1 775 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 FBXO36Q8NEA4 188 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.82□□□□□ -0.685e-6■■■■□ 19.4
CTSC-203ENST00000524463 BCL2L14Q9BZR8 327 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 MIEF1Q9NQG6 463 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 GPRC5DQ9NZD1 345 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 MSRAQ9UJ68 235 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 AP4E1Q9UPM8 1137 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 GPSM3Q9Y4H4 160 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 ARHGEF40Q8TER5 1519 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 GPR75-ASB3A0A0A6YYF3 556 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 CHUKO15111 745 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 OGTO15294 1046 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 ITGALP20701 1170 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 RPA1P27694 616 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 NAB2Q15742 525 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 PPIL6Q8IXY8 311 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 TRPC4APQ8TEL6 797 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 ERP27Q96DN0 273 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 PURBQ96QR8 312 aaKnown RBP10.82□□□□□ -0.68
CTSC-203ENST00000524463 B2RBV5 119 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 PRKAA1Q13131 559 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 MRNIPQ6NTE8 343 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 UNC45BQ8IWX7 931 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 POMGNT2Q8NAT1 580 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 UXS1Q8NBZ7 420 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 PACSIN1Q9BY11 444 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 TMEM245Q9H330 911 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.82□□□□□ -0.68
CTSC-203ENST00000524463 NCKAP1Q9Y2A7 1128 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 ABCC3O15438 1527 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 USP17L7P0C7H9 530 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 ITIH2P19823 946 aa10.82□□□□□ -0.68
CTSC-203ENST00000524463 BDNFP23560 247 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms