RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 FBXO44Q9H4M3 255 aa22.4■■□□□ 1.18
R3HCC1-208ENST00000522012 ASNSD1Q9NWL6 643 aa22.4■■□□□ 1.18
R3HCC1-208ENST00000522012 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.4■■□□□ 1.18
R3HCC1-208ENST00000522012 YIPF1Q9Y548 306 aa22.4■■□□□ 1.18
R3HCC1-208ENST00000522012 A0A1W2PPC1 479 aa22.39■■□□□ 1.17
R3HCC1-208ENST00000522012 SLC38A8A6NNN8 435 aa22.39■■□□□ 1.17
R3HCC1-208ENST00000522012 RTN3O95197 1032 aaPredicted RBP22.39■■□□□ 1.17
R3HCC1-208ENST00000522012 SSR1P43307 286 aaKnown RBP22.39■■□□□ 1.17
R3HCC1-208ENST00000522012 USP46P62068 366 aa22.39■■□□□ 1.17
R3HCC1-208ENST00000522012 MTMR3Q13615 1198 aa22.39■■□□□ 1.17
R3HCC1-208ENST00000522012 PDE12Q6L8Q7 609 aaKnown RBP22.39■■□□□ 1.17
R3HCC1-208ENST00000522012 ARCQ7LC44 396 aa22.39■■□□□ 1.17
R3HCC1-208ENST00000522012 TCEAL8Q8IYN2 117 aa22.39■■□□□ 1.17
R3HCC1-208ENST00000522012 DEFB106AQ8N104 65 aa22.39■■□□□ 1.17
R3HCC1-208ENST00000522012 CFAP57Q96MR6 1250 aa22.39■■□□□ 1.17
R3HCC1-208ENST00000522012 CNPY3Q9BT09 278 aa22.39■■□□□ 1.17
R3HCC1-208ENST00000522012 TLR10Q9BXR5 811 aa22.39■■□□□ 1.17
R3HCC1-208ENST00000522012 NLRC5Q86WI3 1866 aa22.38■■□□□ 1.17
R3HCC1-208ENST00000522012 DAB1O75553 588 aa22.38■■□□□ 1.17
R3HCC1-208ENST00000522012 LTFP02788 710 aa22.38■■□□□ 1.17
R3HCC1-208ENST00000522012 YWHAQP27348 245 aa22.38■■□□□ 1.17
R3HCC1-208ENST00000522012 SDC4P31431 198 aa22.38■■□□□ 1.17
R3HCC1-208ENST00000522012 MAN1A1P33908 653 aa22.38■■□□□ 1.17
R3HCC1-208ENST00000522012 CCDC14Q49A88 953 aa22.38■■□□□ 1.17
R3HCC1-208ENST00000522012 DAB2IPQ5VWQ8 1189 aa22.38■■□□□ 1.17
R3HCC1-208ENST00000522012 BHLHA9Q7RTU4 235 aa22.38■■□□□ 1.17
R3HCC1-208ENST00000522012 POPDC2Q9HBU9 364 aa22.38■■□□□ 1.17
R3HCC1-208ENST00000522012 MAGED2Q9UNF1 606 aaPredicted RBP22.38■■□□□ 1.17
R3HCC1-208ENST00000522012 SCML2Q9UQR0 700 aa22.38■■□□□ 1.17
R3HCC1-208ENST00000522012 DPYSL4O14531 572 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 CAPN9O14815 690 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 URI1O94763 535 aaPredicted RBP22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 GLUD1P00367 558 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 DESP17661 470 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 MATKP42679 507 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 YWHAGP61981 247 aaKnown RBP eCLIP22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 ATP11AP98196 1134 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 TWF1Q12792 350 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 C15orf59Q2T9L4 293 aaPredicted RBP22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 DCAF6Q58WW2 860 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 BSPRYQ5W0U4 402 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 CC2D1AQ6P1N0 951 aaPredicted RBP22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 LILRA6Q6PI73 481 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 NIPA2Q8N8Q9 360 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 TIFAQ96CG3 184 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 CEP295NLQ96MC4 621 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 DDX23Q9BUQ8 820 aaKnown RBP22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 COMMD8Q9NX08 183 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 IL37Q9NZH6 218 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 NAALADL1Q9UQQ1 740 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 INSL5Q9Y5Q6 135 aa22.37■■□□□ 1.17
R3HCC1-208ENST00000522012 RNF8O76064 485 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 VEPH1Q14D04 833 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 TAF12Q16514 161 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 CDO1Q16878 200 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 PAPD7Q5XG87 772 aaKnown RBP22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 KREMEN2Q8NCW0 462 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 GDPD5Q8WTR4 605 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 EDEM1Q92611 657 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 FBXO32Q969P5 355 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 HES6Q96HZ4 224 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 SLC2A13Q96QE2 648 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 PSMB7Q99436 277 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 PLXNA4Q9HCM2 1894 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 FYNP06241 537 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 NCAM1P13591 858 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 NOS2P35228 1153 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 EPHB3P54753 998 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 SMAD3P84022 425 aaKnown RBP22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 ACAP1Q15027 740 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 SH3PXD2AQ5TCZ1 1133 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 SYPL2Q5VXT5 272 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 CCDC149Q6ZUS6 474 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 MON1AQ86VX9 555 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 SLC7A14Q8TBB6 771 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 TRIM62Q9BVG3 475 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 GMIPQ9P107 970 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 FBXW11Q9UKB1 542 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 SNX12Q9UMY4 172 aa22.36■■□□□ 1.17
R3HCC1-208ENST00000522012 A0A1W2PQH9 124 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 MIF4GDA9UHW6 222 aaKnown RBP22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 CSH1P0DML2 217 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 CSH2P0DML3 217 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 PTPN9P43378 593 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 SULT1E1P49888 294 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 CLCN4P51793 760 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 TAF10Q12962 218 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 BTBD8Q5XKL5 378 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 SCD5Q86SK9 330 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 ARHGAP18Q8N392 663 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 UBL4BQ8N7F7 174 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 UBE2Q2Q8WVN8 375 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 CD101Q93033 1021 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 LMAN2LQ9H0V9 348 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 EHD2Q9NZN4 543 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 STAP1Q9ULZ2 295 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 SAR1BQ9Y6B6 198 aa22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 RANBP2P49792 3224 aaKnown RBP22.35■■□□□ 1.17
R3HCC1-208ENST00000522012 EPOPA6NHQ4 379 aa22.34■■□□□ 1.17
R3HCC1-208ENST00000522012 DDX3YO15523 660 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms