RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	RAB41	Q5JT25	222 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	DUPD1	Q68J44	220 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	TRNP1	Q6NT89	227 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	TTC27	Q6P3X3	843 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	ZNF280B	Q86YH2	543 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	PSTK	Q8IV42	348 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	SCUBE3	Q8IX30	993 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	KRT222	Q8N1A0	295 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	LRRC43	Q8N309	656 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	MREG	Q8N565	214 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	ARFGAP1	Q8N6T3	406 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	ATL2	Q8NHH9	583 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	HASPIN	Q8TF76	798 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	FAM172A	Q8WUF8	416 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	IFT81	Q8WYA0	676 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	CENPI	Q92674	756 aa	Predicted RBP	12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	PIWIL1	Q96J94	861 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	PKNOX2	Q96KN3	472 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	CFAP57	Q96MR6	1250 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	CASD1	Q96PB1	797 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	PKMYT1	Q99640	499 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	DDX23	Q9BUQ8	820 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	ZWILCH	Q9H900	591 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	PRDM16	Q9HAZ2	1276 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	NGRN	Q9NPE2	291 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	ADAM28	Q9UKQ2	775 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	TBX21	Q9UL17	535 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	NFU1	Q9UMS0	254 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	TIMM13	Q9Y5L4	95 aa	Predicted RBP	12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	OR6C75	A6NL08	312 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	C3orf70	A6NLC5	250 aa	Predicted RBP	12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	PI4K2B	G5E9Z4	385 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711		I3L4J1	428 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	TADA2A	O75478	443 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	GRAP2	O75791	330 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	GABBR2	O75899	941 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	CLTB	P09497	229 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	KDELR1	P24390	212 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	IL1R2	P27930	398 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	NOS2	P35228	1153 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	TKTL1	P51854	596 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	AIF1	P55008	147 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	MRPS25	P82663	173 aa	Known RBP	12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	TLE2	Q04725	743 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	ADCY1	Q08828	1119 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	PTK6	Q13882	451 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	TFDP2	Q14188	446 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	NFE2	Q16621	373 aa	Predicted RBP	12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	CDO1	Q16878	200 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	C15orf59	Q2T9L4	293 aa	Predicted RBP	12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	SMTNL2	Q2TAL5	461 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	TXNRD3NB	Q6F5E7	133 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	BBS12	Q6ZW61	710 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	SND1	Q7KZF4	910 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	SPATA2L	Q8IUW3	424 aa	Predicted RBP	12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	GSPT2	Q8IYD1	628 aa	Known RBP	12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	ZDHHC14	Q8IZN3	488 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	KCTD6	Q8NC69	237 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	BBOF1	Q8ND07	529 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	RAPGEF5	Q92565	580 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	FAM149B1	Q96BN6	582 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	LRRC45	Q96CN5	670 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	FUBP3	Q96I24	572 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	CCDC114	Q96M63	670 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	SLC2A13	Q96QE2	648 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	SMO	Q99835	787 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	TRIM51	Q9BSJ1	452 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	C11orf84	Q9BUA3	381 aa	Predicted RBP	12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	HEMGN	Q9BXL5	484 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	POPDC2	Q9HBU9	364 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	KLHL11	Q9NVR0	708 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	TMEM51	Q9NW97	253 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	FAM53C	Q9NYF3	392 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	MTRF1L	Q9UGC7	380 aa	Known RBP	12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	PCSK1N	Q9UHG2	260 aa		12.48	□□□□□ -0.41
LMNA-224	ENST00000515711	ESYT3	A0FGR9	886 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	LIAS	O43766	372 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	EFCAB14	O75071	495 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	SASH3	O75995	380 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	ENDOD1	O94919	500 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	ITGB1	P05556	798 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	SULT1E1	P49888	294 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	DAOA	P59103	153 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	YWHAZ	P63104	245 aa	Known RBP	12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	ATP11A	P98196	1134 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	CAV1	Q03135	178 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	KRT17	Q04695	432 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	SMARCB1	Q12824	385 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	CALCOCO2	Q13137	446 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	MTMR3	Q13615	1198 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	IKBKE	Q14164	716 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	KRT81	Q14533	505 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	SLC25A52	Q3SY17	297 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	ATP13A4	Q4VNC1	1196 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	SPDYC	Q5MJ68	293 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	KAZN	Q674X7	775 aa		12.47	□□□□□ -0.41
LMNA-224	ENST00000515711	ZNF280D	Q6N043	979 aa		12.47	□□□□□ -0.41

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