RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-210	ENST00000513153	RASAL1	O95294	804 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	MYB	P10242	640 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	CREB1	P16220	341 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	HOXD9	P28356	352 aa	Predicted RBP	4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	DIO1	P49895	249 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	TIRAP	P58753	221 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	TWIST1	Q15672	202 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	TRIM71	Q2Q1W2	868 aa	Known RBP	4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	C10orf25	Q5T742	122 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	SHC4	Q6S5L8	630 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	PIP4P1	Q86T03	277 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	OR56A3	Q8NH54	315 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	PNISR	Q8TF01	805 aa	Known RBP	4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	MAML1	Q92585	1016 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	SPSB4	Q96A44	273 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	VN1R3	Q9BXE9	311 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	B3GNT5	Q9BYG0	378 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	TMEM60	Q9H2L4	133 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	SNX15	Q9NRS6	342 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	GAR1	Q9NY12	217 aa	Known RBP	4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	DNMT3B	Q9UBC3	853 aa	Known RBP	4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	PI4KB	Q9UBF8	816 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	TTC3	P53804	2025 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	LOC102723971	A0A1B0GUV8	181 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	TMEM191B	P0C7N4	346 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	APEH	P13798	732 aa	Known RBP	4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	PRF1	P14222	555 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	EPHB1	P54762	984 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	SUMO3	P55854	103 aa	Predicted RBP	4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	IGBP1	P78318	339 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	RBMS2	Q15434	407 aa	Known RBP	4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	NPY5R	Q15761	445 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	CACHD1	Q5VU97	1274 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	TMEM65	Q6PI78	240 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	KCTD20	Q7Z5Y7	419 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	MICU3	Q86XE3	530 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	LIX1L	Q8IVB5	337 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	ACRBP	Q8NEB7	543 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	OSR1	Q8TAX0	266 aa	Predicted RBP	4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	MAP4K1	Q92918	833 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	ZBTB45	Q96K62	511 aa	Predicted RBP	4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	TRIM36	Q9NQ86	728 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	ZIM2	Q9NZV7	527 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	CPNE7	Q9UBL6	633 aa		4.55	□□□□□ -1.68
LINC01088-210	ENST00000513153	TRIM43B	A6NCK2	446 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	MBD3L3	A6NE82	208 aa	Predicted RBP	4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	ISM1	B1AKI9	464 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	PYCARD-AS1	I3L0S3	204 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	CD3EAP	O15446	510 aa	Known RBP	4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	CCP110	O43303	1012 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	SPRY2	O43597	315 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	SRGAP2	O75044	1071 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	RNF8	O76064	485 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	THBS4	P35443	961 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	MTHFS	P49914	203 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	HYAL1	Q12794	435 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	LARS2	Q15031	903 aa	Known RBP	4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	CHPF	Q8IZ52	775 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	KIAA0319L	Q8IZA0	1049 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	LINC01465	Q8N7H1	131 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	IGFBPL1	Q8WX77	278 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	RUNDC1	Q96C34	613 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	SIGLEC11	Q96RL6	698 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	C22orf23	Q9BZE7	217 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	SACM1L	Q9NTJ5	587 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	L1RE1	Q9UN81	338 aa		4.54	□□□□□ -1.68
LINC01088-210	ENST00000513153	CFAP69	A5D8W1	941 aa		4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153		H7C4K7	107 aa		4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	TMPRSS11D	O60235	418 aa		4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	RASSF9	O75901	435 aa		4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	PTDSS1	P48651	473 aa	Known RBP	4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	GATM	P50440	423 aa		4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	ARHGEF7	Q14155	803 aa		4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	AWAT1	Q58HT5	328 aa		4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	TMTC4	Q5T4D3	741 aa		4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	CXorf57	Q6NSI4	855 aa	Known RBP	4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	SWSAP1	Q6NVH7	229 aa		4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	RANBP10	Q6VN20	620 aa		4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	DCDC5	Q6ZRR9	648 aa		4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153		Q6ZTC4	211 aa		4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	NMD3	Q96D46	503 aa	Known RBP	4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	DHX36	Q9H2U1	1008 aa	Known RBP	4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	STK32B	Q9NY57	414 aa		4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	TPCN1	Q9ULQ1	816 aa		4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	MAFF	Q9ULX9	164 aa		4.53	□□□□□ -1.68
LINC01088-210	ENST00000513153	EXOC5	O00471	708 aa		4.52	□□□□□ -1.69
LINC01088-210	ENST00000513153	RRP9	O43818	475 aa	Known RBP	4.52	□□□□□ -1.69
LINC01088-210	ENST00000513153	HGF	P14210	728 aa		4.52	□□□□□ -1.69
LINC01088-210	ENST00000513153	CD19	P15391	556 aa		4.52	□□□□□ -1.69
LINC01088-210	ENST00000513153	ATF7	P17544	494 aa	Predicted RBP	4.52	□□□□□ -1.69
LINC01088-210	ENST00000513153	KLRC1	P26715	233 aa		4.52	□□□□□ -1.69
LINC01088-210	ENST00000513153	CFHR3	Q02985	330 aa		4.52	□□□□□ -1.69
LINC01088-210	ENST00000513153	CNN3	Q15417	329 aa	Known RBP	4.52	□□□□□ -1.69
LINC01088-210	ENST00000513153	ZNF750	Q32MQ0	723 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms