RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 CHKAP35790 457 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 KLHL38Q2WGJ6 581 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 ACCSLQ4AC99 568 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 FAM117BQ6P1L5 589 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 MAEAQ7L5Y9 396 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 GSTA5Q7RTV2 222 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 ECHDC2Q86YB7 292 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 PHF13Q86YI8 300 aaPredicted RBP13.43□□□□□ -0.26
HMGB2-205ENST00000511316 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.43□□□□□ -0.269e-15■■□□□ 11.9
HMGB2-205ENST00000511316 RNF149Q8NC42 400 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 THOC1Q96FV9 657 aaKnown RBP13.43□□□□□ -0.26
HMGB2-205ENST00000511316 NAF1Q96HR8 494 aaKnown RBP13.43□□□□□ -0.26
HMGB2-205ENST00000511316 FAXDC2Q96IV6 333 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 NLRP4Q96MN2 994 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 TLE6Q9H808 572 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 DCLRE1BQ9H816 532 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 CHST7Q9NS84 486 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 SPATS2LQ9NUQ6 558 aaKnown RBP13.43□□□□□ -0.26
HMGB2-205ENST00000511316 DDX56Q9NY93 547 aaKnown RBP13.43□□□□□ -0.26
HMGB2-205ENST00000511316 PSMC3IPQ9P2W1 217 aaPredicted RBP13.43□□□□□ -0.26
HMGB2-205ENST00000511316 STOML1Q9UBI4 398 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 PHTF1Q9UMS5 762 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 STK38LQ9Y2H1 464 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 TLL1O43897 1013 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 NEBLO76041 1014 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 UPP2O95045 317 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 SLC34A2O95436 690 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 AMHP03971 560 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 KRT5P13647 590 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 ACADSP16219 412 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 ATF7P17544 494 aaPredicted RBP13.43□□□□□ -0.26
HMGB2-205ENST00000511316 KLRC2P26717 231 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 TAF11Q15544 211 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 RAB30Q15771 203 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 HHATQ5VTY9 493 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 FAM43BQ6ZT52 329 aaPredicted RBP13.43□□□□□ -0.26
HMGB2-205ENST00000511316 SLC24A5Q71RS6 500 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 ZNF598Q86UK7 904 aaKnown RBP13.43□□□□□ -0.26
HMGB2-205ENST00000511316 GPD1LQ8N335 351 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 TTC13Q8NBP0 860 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 MCPH1Q8NEM0 835 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 GDAP1Q8TB36 358 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 DENND1AQ8TEH3 1009 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 CDX2Q99626 313 aaPredicted RBP13.43□□□□□ -0.26
HMGB2-205ENST00000511316 NFKBIZQ9BYH8 718 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 GCOM2Q9BZD3 368 aaPredicted RBP13.43□□□□□ -0.26
HMGB2-205ENST00000511316 VCXQ9H320 206 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 MMADHCQ9H3L0 296 aaPredicted RBP13.43□□□□□ -0.26
HMGB2-205ENST00000511316 TRABDQ9H4I3 376 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 RNF19AQ9NV58 838 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 PARVAQ9NVD7 372 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 MSRAQ9UJ68 235 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 INSL6Q9Y581 213 aa13.43□□□□□ -0.26
HMGB2-205ENST00000511316 MUC3AQ02505 3323 aa13.42□□□□□ -0.26
HMGB2-205ENST00000511316 LINC01553A4QN01 128 aa13.42□□□□□ -0.26
HMGB2-205ENST00000511316 TTLL13PA6NNM8 815 aa13.42□□□□□ -0.26
HMGB2-205ENST00000511316 ALOX15BO15296 676 aa13.42□□□□□ -0.26
HMGB2-205ENST00000511316 SMNDC1O75940 238 aaKnown RBP eCLIP13.42□□□□□ -0.261e-6■■■■□ 21.6
HMGB2-205ENST00000511316 PTPN4P29074 926 aa13.42□□□□□ -0.26
HMGB2-205ENST00000511316 CLDN10P78369 228 aa13.42□□□□□ -0.26
HMGB2-205ENST00000511316 CYP24A1Q07973 514 aa13.42□□□□□ -0.26
HMGB2-205ENST00000511316 ADGRE1Q14246 886 aa13.42□□□□□ -0.26
HMGB2-205ENST00000511316 MXD4Q14582 209 aaPredicted RBP13.42□□□□□ -0.26
HMGB2-205ENST00000511316 LBRQ14739 615 aaKnown RBP13.42□□□□□ -0.26
HMGB2-205ENST00000511316 TMED2Q15363 201 aa13.42□□□□□ -0.26
HMGB2-205ENST00000511316 SEPT7Q16181 437 aaKnown RBP13.42□□□□□ -0.26
HMGB2-205ENST00000511316 MON1BQ7L1V2 547 aa13.42□□□□□ -0.26
HMGB2-205ENST00000511316 L3MBTL1Q9Y468 752 aa13.42□□□□□ -0.26
HMGB2-205ENST00000511316 A0A0U1RQF3 1178 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 ATMINO43313 823 aaPredicted RBP13.41□□□□□ -0.26
HMGB2-205ENST00000511316 LPXNO60711 386 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 LSM8O95777 96 aaKnown RBP13.41□□□□□ -0.26
HMGB2-205ENST00000511316 IL1BP01584 269 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 EDN1P05305 212 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 CALB1P05937 261 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 RALAP11233 206 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 KRT15P19012 456 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 ATP6V1C1P21283 382 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 AP3M2P53677 418 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 MBTD1Q05BQ5 628 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 SNX1Q13596 522 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 SGSM1Q2NKQ1 1148 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 FAM102BQ5T8I3 360 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 PLEKHA7Q6IQ23 1121 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 TMEM161BQ8NDZ6 487 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 NKD2Q969F2 451 aaPredicted RBP13.41□□□□□ -0.26
HMGB2-205ENST00000511316 ERP27Q96DN0 273 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 RMDN2Q96LZ7 410 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 POLR3FQ9H1D9 316 aaPredicted RBP13.41□□□□□ -0.26
HMGB2-205ENST00000511316 VPS11Q9H270 941 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 SLC28A3Q9HAS3 691 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 PCDH9Q9HC56 1237 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 CCDC22O60826 627 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 TGDSO95455 350 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 ITGAVP06756 1048 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 ADRB2P07550 413 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 NEFHP12036 1026 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 GNAZP19086 355 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 PEX3P56589 373 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 GRIK3Q13003 919 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms