RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 MGAMO43451 1857 aa13.97□□□□□ -0.17
SNCAIP-209ENST00000508017 FAM189A1O60320 539 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 CIB2O75838 187 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 MAP3K6O95382 1288 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 ASPAP45381 313 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 ACTR3P61158 418 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 C1orf146Q5VVC0 180 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 C1orf228Q6PIY5 440 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 XYLT1Q86Y38 959 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 WDR49Q8IV35 697 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 CMASQ8NFW8 434 aaPredicted RBP13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 GBP5Q96PP8 586 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 CCDC106Q9BWC9 280 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 ASCC2Q9H1I8 757 aaPredicted RBP13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 DHX33Q9H6R0 707 aaKnown RBP13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 NDE1Q9NXR1 346 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 KLHL33A6NCF5 533 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 VWA5AO00534 786 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 TRUB2O95900 331 aaKnown RBP13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 SNRPAP09012 282 aaKnown RBP13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 YY1P25490 414 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 ABCD1P33897 745 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 DSG1Q02413 1049 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 CDC16Q13042 620 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 CAPSQ13938 189 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 TRMT5Q32P41 509 aaKnown RBP13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 ANGEL2Q5VTE6 544 aaKnown RBP13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 RAPH1Q70E73 1250 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 NUDCD3Q8IVD9 361 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 RILPQ96NA2 401 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 TCHPQ9BT92 498 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 WWP1Q9H0M0 922 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 POPDC2Q9HBU9 364 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 PCMTD2Q9NV79 361 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 SIRPGQ9P1W8 387 aa13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 NXF1Q9UBU9 619 aaKnown RBP13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 HBS1LQ9Y450 684 aaKnown RBP13.96□□□□□ -0.17
SNCAIP-209ENST00000508017 H7C0C1 242 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 CSH1P0DML2 217 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 CSH2P0DML3 217 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 ATP5OP48047 213 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 IRX4P78413 519 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 TFAMQ00059 246 aaKnown RBP13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 NOMO1Q15155 1222 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 GSTA3Q16772 222 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 ZNF699Q32M78 642 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 CEP120Q8N960 986 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 MTBPQ96DY7 904 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 PNPLA8Q9NP80 782 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 PDP2Q9P2J9 529 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 ZC3H7BQ9UGR2 993 aaKnown RBP13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 USP18Q9UMW8 372 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 COL4A5P29400 1685 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 PARP14Q460N5 1801 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 MAFGO15525 162 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 RNASEH1O60930 286 aaKnown RBP13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 KRT37O76014 449 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 RTN3O95197 1032 aaPredicted RBP13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 OATP04181 439 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 POLR2BP30876 1174 aaKnown RBP13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 STIP1P31948 543 aaKnown RBP13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 CDH8P55286 799 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 YWHAEP62258 255 aaKnown RBP13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 AP2B1P63010 937 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 TRPC3Q13507 836 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 ATG16L1Q676U5 607 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 XRRA1Q6P2D8 792 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 GSTCDQ8NEC7 633 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 FNIP1Q8TF40 1166 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 AKT1S1Q96B36 256 aa13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 NR1H4Q96RI1 486 aaPredicted RBP13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.95□□□□□ -0.18
SNCAIP-209ENST00000508017 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 HMX2A2RU54 273 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 PIK3R2O00459 728 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 CHADO15335 359 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 BUD23O43709 281 aaKnown RBP13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 SPAG6O75602 509 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 SORBS2O94875 1100 aaKnown RBP13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 C6orf222P0C671 652 aaPredicted RBP13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 CCNFP41002 786 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 CDH6P55285 790 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 PDE1BQ01064 536 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 SNRNP48Q6IEG0 339 aaKnown RBP13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 TRMT10BQ6PF06 316 aaKnown RBP13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 CYP4V2Q6ZWL3 525 aaPredicted RBP13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 FAM83AQ86UY5 434 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 CAND1Q86VP6 1230 aaKnown RBP13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 CRLF3Q8IUI8 442 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 NSUN6Q8TEA1 469 aaKnown RBP13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 MMP19Q99542 508 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 XYLT2Q9H1B5 865 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 EBF3Q9H4W6 596 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 USP29Q9HBJ7 922 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 ZNF302Q9NR11 478 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 HMGXB4Q9UGU5 601 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 A0A088AWK7 358 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 KCNN4O15554 427 aa13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 SNNO75324 88 aaPredicted RBP13.94□□□□□ -0.18
SNCAIP-209ENST00000508017 LGR5O75473 907 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms