RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 SLC4A5Q9BY07 1137 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 SLC46A2Q9BY10 475 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 TRIM5Q9C035 493 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 RBSNQ9H1K0 784 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 KIF9Q9HAQ2 790 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 KCNK12Q9HB15 430 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 THG1LQ9NWX6 298 aaKnown RBP13.09□□□□□ -0.31
COL4A5-206ENST00000489230 AIPL1Q9NZN9 384 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 CAPN11Q9UMQ6 739 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 SP100P23497 879 aaPredicted RBP13.08□□□□□ -0.32
COL4A5-206ENST00000489230 AVPR2P30518 371 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 VCPP55072 806 aaKnown RBP13.08□□□□□ -0.32
COL4A5-206ENST00000489230 ZBED6P86452 979 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 TDGQ13569 410 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 TXNDC8Q6A555 127 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 DENND1BQ6P3S1 775 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 KLHDC10Q6PID8 442 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 ZDHHC17Q8IUH5 632 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 ARID3BQ8IVW6 561 aaPredicted RBP13.08□□□□□ -0.32
COL4A5-206ENST00000489230 UBALD2Q8IYN6 164 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 PPP1R13BQ96KQ4 1090 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 ZSWIM3Q96MP5 696 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 NACA2Q9H009 215 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 TRPC7Q9HCX4 862 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 ACP6Q9NPH0 428 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 ST7Q9NRC1 585 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 TDP1Q9NUW8 608 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 ZDBF2Q9HCK1 2354 aa13.08□□□□□ -0.32
COL4A5-206ENST00000489230 CKMP06732 381 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 LCP1P13796 627 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 CDH5P33151 784 aaPredicted RBP13.07□□□□□ -0.32
COL4A5-206ENST00000489230 ATP5C1P36542 298 aaKnown RBP13.07□□□□□ -0.32
COL4A5-206ENST00000489230 SLC7A9P82251 487 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 CYP4F8P98187 520 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 ARID5AQ03989 594 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 HTR4Q13639 388 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 ASIC2Q16515 512 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 PTPN21Q16825 1174 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 IRF2BP2Q7Z5L9 587 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 DDX42Q86XP3 938 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL4A5-206ENST00000489230 MFSD6LQ8IWD5 586 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 YAF2Q8IY57 180 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 DRC7Q8IY82 874 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 SLC44A3Q8N4M1 653 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 EPS8L1Q8TE68 723 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 DEPDC1BQ8WUY9 529 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 DDX1Q92499 740 aaKnown RBP13.07□□□□□ -0.32
COL4A5-206ENST00000489230 BAP1Q92560 729 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 ASIC4Q96FT7 647 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 AGPAT1Q99943 283 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 SYNCQ9H7C4 482 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 ABCC13Q9NSE7 274 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 OLA1Q9NTK5 396 aaKnown RBP13.07□□□□□ -0.32
COL4A5-206ENST00000489230 TMEM51Q9NW97 253 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 GMIPQ9P107 970 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 NAGPAQ9UK23 515 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 SORCS3Q9UPU3 1222 aa13.07□□□□□ -0.32
COL4A5-206ENST00000489230 KMT2EQ8IZD2 1858 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 LRRC53A6NM62 1247 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 TULP2O00295 520 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 CALCAP01258 141 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 GLI1P08151 1106 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 PNMA6AP0CW24 399 aaPredicted RBP13.06□□□□□ -0.32
COL4A5-206ENST00000489230 RARGP13631 454 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 TCF3P15923 654 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 PSMC3P17980 439 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 TNFAIP3P21580 790 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 RGS7P49802 495 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 YWHAGP61981 247 aaKnown RBP eCLIP13.06□□□□□ -0.32
COL4A5-206ENST00000489230 PFKPQ01813 784 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 GOLGA8FQ08AF8 430 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 GOLGA8DPQ0D2H9 430 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 ADIGQ0VDE8 80 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 PDCLQ13371 301 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 EFHC1Q5JVL4 640 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 BTBD8Q5XKL5 378 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 TANGO2Q6ICL3 276 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 CC2D1AQ6P1N0 951 aaPredicted RBP13.06□□□□□ -0.32
COL4A5-206ENST00000489230 PARM1Q6UWI2 310 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 BEND5Q7L4P6 421 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 GPRIN1Q7Z2K8 1008 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 NOP9Q86U38 636 aaKnown RBP13.06□□□□□ -0.32
COL4A5-206ENST00000489230 VPS36Q86VN1 386 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 ERICH1Q86X53 443 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 GAS2L3Q86XJ1 694 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 VSTM4Q8IW00 320 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 SCUBE3Q8IX30 993 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 WDTC1Q8N5D0 677 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 C1orf131Q8NDD1 294 aaKnown RBP13.06□□□□□ -0.32
COL4A5-206ENST00000489230 IPO4Q8TEX9 1081 aaKnown RBP13.06□□□□□ -0.32
COL4A5-206ENST00000489230 RNF139Q8WU17 664 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 CPLX3Q8WVH0 158 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 CYP2S1Q96SQ9 504 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 TRMT61BQ9BVS5 477 aaKnown RBP13.06□□□□□ -0.32
COL4A5-206ENST00000489230 ULBP1Q9BZM6 244 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 TTYH3Q9C0H2 523 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 ZNHIT6Q9NWK9 470 aaKnown RBP13.06□□□□□ -0.32
COL4A5-206ENST00000489230 DNMT3LQ9UJW3 386 aa13.06□□□□□ -0.32
COL4A5-206ENST00000489230 NOCTQ9UK39 431 aaKnown RBP13.06□□□□□ -0.32
COL4A5-206ENST00000489230 ARHGAP26Q9UNA1 814 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms