RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PTDSS1P48651 473 aaKnown RBP5.18□□□□□ -1.58
SMC4-219ENST00000487747 RGS19P49795 217 aa5.18□□□□□ -1.58
SMC4-219ENST00000487747 CFHR1Q03591 330 aa5.18□□□□□ -1.58
SMC4-219ENST00000487747 NPY5RQ15761 445 aa5.18□□□□□ -1.58
SMC4-219ENST00000487747 DCDC5Q6ZRR9 648 aa5.18□□□□□ -1.58
SMC4-219ENST00000487747 METTL25Q8N6Q8 603 aa5.18□□□□□ -1.58
SMC4-219ENST00000487747 ZNF548Q8NEK5 533 aaPredicted RBP5.18□□□□□ -1.58
SMC4-219ENST00000487747 CUL5Q93034 780 aa5.18□□□□□ -1.58
SMC4-219ENST00000487747 SPSB4Q96A44 273 aa5.18□□□□□ -1.58
SMC4-219ENST00000487747 KAZALD1Q96I82 304 aa5.18□□□□□ -1.58
SMC4-219ENST00000487747 CDH19Q9H159 772 aa5.18□□□□□ -1.58
SMC4-219ENST00000487747 SACM1LQ9NTJ5 587 aa5.18□□□□□ -1.58
SMC4-219ENST00000487747 HEY2Q9UBP5 337 aa5.18□□□□□ -1.58
SMC4-219ENST00000487747 CCDC187A0A096LP49 1063 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 TRIM43BA6NCK2 446 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 H3BNC9 293 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 PYCARD-AS1I3L0S3 204 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 EXOC5O00471 708 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 PRPF3O43395 683 aaKnown RBP5.17□□□□□ -1.58
SMC4-219ENST00000487747 TLR2O60603 784 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 PDGFRBP09619 1106 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 YPEL5P62699 121 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 SLC14A1Q13336 389 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 C3orf38Q5JPI3 329 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 APOA5Q6Q788 366 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 RAB11FIP4Q86YS3 637 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 RAVER1Q8IY67 606 aaKnown RBP5.17□□□□□ -1.58
SMC4-219ENST00000487747 ADAMTS15Q8TE58 950 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 TRIM43Q96BQ3 446 aaPredicted RBP5.17□□□□□ -1.58
SMC4-219ENST00000487747 PPP1R9BQ96SB3 815 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 SNX15Q9NRS6 342 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 DDX56Q9NY93 547 aaKnown RBP5.17□□□□□ -1.58
SMC4-219ENST00000487747 ZIM2Q9NZV7 527 aa5.17□□□□□ -1.58
SMC4-219ENST00000487747 LOC102723971A0A1B0GUV8 181 aa5.16□□□□□ -1.58
SMC4-219ENST00000487747 CTNND1O60716 968 aaKnown RBP5.16□□□□□ -1.58
SMC4-219ENST00000487747 RASSF9O75901 435 aa5.16□□□□□ -1.58
SMC4-219ENST00000487747 TMEM191BP0C7N4 346 aa5.16□□□□□ -1.58
SMC4-219ENST00000487747 IBSPP21815 317 aaPredicted RBP5.16□□□□□ -1.58
SMC4-219ENST00000487747 NTSR1P30989 418 aa5.16□□□□□ -1.58
SMC4-219ENST00000487747 CCKARP32238 428 aa5.16□□□□□ -1.58
SMC4-219ENST00000487747 KCNB1Q14721 858 aa5.16□□□□□ -1.58
SMC4-219ENST00000487747 INSCQ1MX18 579 aa5.16□□□□□ -1.58
SMC4-219ENST00000487747 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.16□□□□□ -1.586e-65■■■■■ 143.5
SMC4-219ENST00000487747 CHPFQ8IZ52 775 aa5.16□□□□□ -1.58
SMC4-219ENST00000487747 C11orf44Q8N8P7 122 aa5.16□□□□□ -1.58
SMC4-219ENST00000487747 NSMCE1Q8WV22 266 aa5.16□□□□□ -1.58
SMC4-219ENST00000487747 RUNDC1Q96C34 613 aa5.16□□□□□ -1.58
SMC4-219ENST00000487747 EDC3Q96F86 508 aaKnown RBP5.16□□□□□ -1.58
SMC4-219ENST00000487747 CAMK1GQ96NX5 476 aa5.16□□□□□ -1.58
SMC4-219ENST00000487747 STK31Q9BXU1 1019 aa5.16□□□□□ -1.58
SMC4-219ENST00000487747 GAR1Q9NY12 217 aaKnown RBP5.16□□□□□ -1.58
SMC4-219ENST00000487747 ZMYM2Q9UBW7 1377 aa5.16□□□□□ -1.58
SMC4-219ENST00000487747 E2F8A0AVK6 867 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 CAPN8A6NHC0 703 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 CD8B2A6NJW9 211 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 A6NNZ2 444 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 M0R3H8 397 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 CLIC1O00299 241 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 RNF8O76064 485 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 PARP1P09874 1014 aaKnown RBP5.15□□□□□ -1.59
SMC4-219ENST00000487747 PHKG2P15735 406 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 MTHFSP49914 203 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 GATMP50440 423 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 PGDP52209 483 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 MFSD13AQ14CX5 517 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 CNN3Q15417 329 aaKnown RBP5.15□□□□□ -1.59
SMC4-219ENST00000487747 ZNF750Q32MQ0 723 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 KIAA0319LQ8IZA0 1049 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 HS6ST2Q96MM7 605 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 TYW1Q9NV66 732 aaKnown RBP5.15□□□□□ -1.59
SMC4-219ENST00000487747 RIMKLBQ9ULI2 386 aa5.15□□□□□ -1.59
SMC4-219ENST00000487747 IGKV2D-30A0A075B6S6 120 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 MBD3L4A6NDZ8 208 aaPredicted RBP5.14□□□□□ -1.59
SMC4-219ENST00000487747 MBD3L3A6NE82 208 aaPredicted RBP5.14□□□□□ -1.59
SMC4-219ENST00000487747 TMPRSS11DO60235 418 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 RFPL1O75677 317 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 ALPLP05186 524 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 CTSAP10619 480 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 PSG1P11464 419 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 IL1R1P14778 569 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 BRAFP15056 766 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 NANOS2P60321 138 aaKnown RBP5.14□□□□□ -1.59
SMC4-219ENST00000487747 RPS16P62249 146 aaKnown RBP5.14□□□□□ -1.59
SMC4-219ENST00000487747 ID2Q02363 134 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 CFHR3Q02985 330 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 SRSF1Q07955 248 aaKnown RBP eCLIP5.14□□□□□ -1.59
SMC4-219ENST00000487747 STK3Q13188 491 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 TWIST1Q15672 202 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 GPR162Q16538 588 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 C4orf46Q504U0 113 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 DEF8Q6ZN54 512 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 USP49Q70CQ1 688 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 WIPF2Q8TF74 440 aaPredicted RBP5.14□□□□□ -1.59
SMC4-219ENST00000487747 TMEM60Q9H2L4 133 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 COL20A1Q9P218 1284 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 PI4KBQ9UBF8 816 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 NOB1Q9ULX3 412 aaKnown RBP5.14□□□□□ -1.59
SMC4-219ENST00000487747 L1RE1Q9UN81 338 aa5.14□□□□□ -1.59
SMC4-219ENST00000487747 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.13□□□□□ -1.59
SMC4-219ENST00000487747 CFAP69A5D8W1 941 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms