RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 EPC1Q9H2F5 836 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 SLITRK6Q9H5Y7 841 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 ATP6V0A4Q9HBG4 840 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 TRIM39Q9HCM9 518 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 TMEM8AQ9HCN3 771 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 KMT5AQ9NQR1 393 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 MBNL3Q9NUK0 354 aaKnown RBP8.2□□□□□ -1.1
SNX13-208ENST00000482558 SAGE1Q9NXZ1 904 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 CYP39A1Q9NYL5 469 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 GPRC5DQ9NZD1 345 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 REV1Q9UBZ9 1251 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 ZNF214Q9UL59 606 aaPredicted RBP8.2□□□□□ -1.1
SNX13-208ENST00000482558 PHIPQ8WWQ0 1821 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 SMCHD1A6NHR9 2005 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 GOLGA6L10A0A0M3HER8 536 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 DDX3XO00571 662 aaKnown RBP eCLIP8.19□□□□□ -1.13e-18■■■□□ 15.2
SNX13-208ENST00000482558 ZNF185O15231 689 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 DYNC1LI2O43237 492 aaPredicted RBP8.19□□□□□ -1.1
SNX13-208ENST00000482558 RTN2O75298 545 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 ZBTB7AO95365 584 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 GGPS1O95749 300 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 ASLP04424 464 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 CD8BP10966 210 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 KCNA2P16389 499 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 TNNT3P45378 269 aaPredicted RBP8.19□□□□□ -1.1
SNX13-208ENST00000482558 NPTX2P47972 431 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 GPC3P51654 580 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 AP3M2P53677 418 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 PEX3P56589 373 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 RING1Q06587 406 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 BNIP3Q12983 259 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 PPFIA1Q13136 1202 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 GALEQ14376 348 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 NEDD9Q14511 834 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 PDCD2Q16342 344 aaPredicted RBP8.19□□□□□ -1.1
SNX13-208ENST00000482558 SNRNP35Q16560 246 aaKnown RBP8.19□□□□□ -1.1
SNX13-208ENST00000482558 ZBTB37Q5TC79 503 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 ANGEL2Q5VTE6 544 aaKnown RBP8.19□□□□□ -1.1
SNX13-208ENST00000482558 C11orf63Q6NUN7 778 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 KIAA1211LQ6NV74 962 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 MZT2BQ6NZ67 158 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 SLC30A10Q6XR72 485 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 LBX2Q6XYB7 198 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 ZNF677Q86XU0 584 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 RASGEF1CQ8N431 466 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 MREGQ8N565 214 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 ANKRD13CQ8N6S4 541 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 UBL4BQ8N7F7 174 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 TMEM161BQ8NDZ6 487 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 LMO3Q8TAP4 145 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 U2AF1L4Q8WU68 220 aaKnown RBP8.19□□□□□ -1.1
SNX13-208ENST00000482558 FAM84AQ96KN4 292 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 FAM167AQ96KS9 214 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 SERINC2Q96SA4 455 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 RUFY1Q96T51 708 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 AGPAT1Q99943 283 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 JPH2Q9BR39 696 aaPredicted RBP8.19□□□□□ -1.1
SNX13-208ENST00000482558 SYT11Q9BT88 431 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 AARSD1Q9BTE6 412 aaKnown RBP8.19□□□□□ -1.1
SNX13-208ENST00000482558 WNT10AQ9GZT5 417 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 CARD9Q9H257 536 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 PDE11AQ9HCR9 933 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 ANLNQ9NQW6 1124 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 GDF3Q9NR23 364 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 NRBP2Q9NSY0 501 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 DDX20Q9UHI6 824 aaKnown RBP8.19□□□□□ -1.1
SNX13-208ENST00000482558 LCMT1Q9UIC8 334 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 TMEM59LQ9UK28 342 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 TFR2Q9UP52 801 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 AFG3L2Q9Y4W6 797 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 TNPO3Q9Y5L0 923 aaKnown RBP8.19□□□□□ -1.1
SNX13-208ENST00000482558 EMSYQ7Z589 1322 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 MYH10P35580 1976 aa8.19□□□□□ -1.1
SNX13-208ENST00000482558 PARP14Q460N5 1801 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 A0A1W2PQU0 124 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 DENND3A2RUS2 1198 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 ZNF233A6NK53 670 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 CCDC169A6NNP5 214 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 KRTAP9-7A8MTY7 169 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 GOLGA8KD6RF30 607 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 KCNK3O14649 394 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 SLC16A4O15374 487 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 HSF2BPO75031 334 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 MTA2O94776 668 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 SLC25A27O95847 323 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 CCNE2O96020 404 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 PIGRP01833 764 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 ASGR2P07307 311 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 SUPT20HL2P0C7V6 817 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 GALCP54803 685 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 HMGCS2P54868 508 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 GPC5P78333 572 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 GCNT1Q02742 428 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 PRKCQQ04759 706 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 C2orf54Q08AI8 447 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 TTLL4Q14679 1199 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 TMEM132BQ14DG7 1078 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 CBWD6Q4V339 395 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 CBWD3Q5JTY5 395 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 SPDYCQ5MJ68 293 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms