RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 OSGEPQ9NPF4 335 aa12.76□□□□□ -0.37
USP11-208ENST00000480104 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.76□□□□□ -0.37
USP11-208ENST00000480104 ANAPC1Q9H1A4 1944 aa12.76□□□□□ -0.37
USP11-208ENST00000480104 DFNA5O60443 496 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 IGLV3-19P01714 112 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 CYP2F1P24903 491 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 ELAVL4P26378 380 aaKnown RBP12.75□□□□□ -0.37
USP11-208ENST00000480104 LSSP48449 732 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 RPL10AP62906 217 aaKnown RBP12.75□□□□□ -0.37
USP11-208ENST00000480104 ORC1Q13415 861 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 NOLC1Q14978 699 aaKnown RBP eCLIP12.75□□□□□ -0.37
USP11-208ENST00000480104 NUMA1Q14980 2115 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 SHBQ15464 509 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 NTRK3Q16288 839 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 ADAT2Q7Z6V5 191 aaKnown RBP12.75□□□□□ -0.37
USP11-208ENST00000480104 FAM124AQ86V42 546 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 METTL23Q86XA0 190 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 THEM5Q8N1Q8 247 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 ELF4Q99607 663 aaPredicted RBP12.75□□□□□ -0.37
USP11-208ENST00000480104 NUP58Q9BVL2 599 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 RNF38Q9H0F5 515 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 PCED1AQ9H1Q7 454 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 ZNF768Q9H5H4 540 aaKnown RBP12.75□□□□□ -0.37
USP11-208ENST00000480104 POLR1BQ9H9Y6 1135 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 DSEQ9UL01 958 aa12.75□□□□□ -0.37
USP11-208ENST00000480104 TTC26A0AVF1 554 aa12.74□□□□□ -0.37
USP11-208ENST00000480104 PRRT4C9JH25 899 aa12.74□□□□□ -0.37
USP11-208ENST00000480104 USP12O75317 370 aa12.74□□□□□ -0.37
USP11-208ENST00000480104 BAG4O95429 457 aaKnown RBP12.74□□□□□ -0.37
USP11-208ENST00000480104 SPATA31C1P0DKV0 1188 aa12.74□□□□□ -0.37
USP11-208ENST00000480104 CKMT2P17540 419 aa12.74□□□□□ -0.37
USP11-208ENST00000480104 FOSBP53539 338 aa12.74□□□□□ -0.37
USP11-208ENST00000480104 SKOR1P84550 965 aa12.74□□□□□ -0.37
USP11-208ENST00000480104 STARD3Q14849 445 aa12.74□□□□□ -0.37
USP11-208ENST00000480104 ZSCAN23Q3MJ62 389 aa12.74□□□□□ -0.37
USP11-208ENST00000480104 TTC22Q5TAA0 569 aa12.74□□□□□ -0.37
USP11-208ENST00000480104 WSCD1Q658N2 575 aa12.74□□□□□ -0.37
USP11-208ENST00000480104 GRAMD4Q6IC98 578 aa12.74□□□□□ -0.37
USP11-208ENST00000480104 SEMA3CQ99985 751 aa12.74□□□□□ -0.37
USP11-208ENST00000480104 PLEKHA5Q9HAU0 1116 aa12.74□□□□□ -0.37
USP11-208ENST00000480104 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.74□□□□□ -0.37
USP11-208ENST00000480104 PCNX1Q96RV3 2341 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 ARHGEF35A5YM69 484 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 CCDC169A6NNP5 214 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 GFRA2O00451 464 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 CYB561D2O14569 222 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 PPFIA2O75334 1257 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 SFTPCP11686 197 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 TNFRSF8P28908 595 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 C21orf59P57076 290 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 TSPY1Q01534 308 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 ST3GAL1Q11201 340 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 NECTIN1Q15223 517 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 SKIDA1Q1XH10 827 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 ANO4Q32M45 955 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 SCFD1Q8WVM8 642 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 SIPA1Q96FS4 1042 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 DNAJC17Q9NVM6 304 aaKnown RBP12.73□□□□□ -0.37
USP11-208ENST00000480104 TBC1D14Q9P2M4 693 aa12.73□□□□□ -0.37
USP11-208ENST00000480104 RP1L1Q8IWN7 2480 aaPredicted RBP12.72□□□□□ -0.37
USP11-208ENST00000480104 ARID1BQ8NFD5 2236 aaPredicted RBP12.72□□□□□ -0.37
USP11-208ENST00000480104 EFSO43281 561 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 XPOTO43592 962 aaKnown RBP12.72□□□□□ -0.37
USP11-208ENST00000480104 OLFM2O95897 454 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 ITGB2P05107 769 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 IFNAR1P17181 557 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 PFKLP17858 780 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 PPP2R3AQ06190 1150 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 CLN3Q13286 438 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 NFE2Q16621 373 aaPredicted RBP12.72□□□□□ -0.37
USP11-208ENST00000480104 CCDC142Q17RM4 750 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 KRTAP21-3Q3LHN1 58 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 SGO2Q562F6 1265 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 C9orf57Q5W0N0 161 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 TMEM25Q86YD3 366 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 TMPRSS6Q8IU80 811 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 LEO1Q8WVC0 666 aaPredicted RBP12.72□□□□□ -0.37
USP11-208ENST00000480104 KIFAP3Q92845 792 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 PYM1Q9BRP8 204 aaKnown RBP12.72□□□□□ -0.37
USP11-208ENST00000480104 ABCB6Q9NP58 842 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 TRPM5Q9NZQ8 1165 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 PCDHA12Q9UN75 941 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 STON1Q9Y6Q2 735 aa12.72□□□□□ -0.37
USP11-208ENST00000480104 LACTBL1A8MY62 500 aa12.71□□□□□ -0.37
USP11-208ENST00000480104 CLTAP09496 248 aa12.71□□□□□ -0.37
USP11-208ENST00000480104 PAX3P23760 479 aa12.71□□□□□ -0.37
USP11-208ENST00000480104 CD27P26842 260 aa12.71□□□□□ -0.37
USP11-208ENST00000480104 EPHA8P29322 1005 aaPredicted RBP12.71□□□□□ -0.37
USP11-208ENST00000480104 ACSL1P33121 698 aa12.71□□□□□ -0.37
USP11-208ENST00000480104 NPTX2P47972 431 aa12.71□□□□□ -0.37
USP11-208ENST00000480104 SPATA1Q5VX52 437 aa12.71□□□□□ -0.37
USP11-208ENST00000480104 PTRH1Q86Y79 214 aaKnown RBP12.71□□□□□ -0.37
USP11-208ENST00000480104 SCN4BQ8IWT1 228 aa12.71□□□□□ -0.37
USP11-208ENST00000480104 PRCCQ92733 491 aaPredicted RBP12.71□□□□□ -0.37
USP11-208ENST00000480104 BIRC7Q96CA5 298 aa12.71□□□□□ -0.37
USP11-208ENST00000480104 CCDC97Q96F63 343 aaPredicted RBP12.71□□□□□ -0.37
USP11-208ENST00000480104 CCNL2Q96S94 520 aaPredicted RBP12.71□□□□□ -0.37
USP11-208ENST00000480104 NAP1L4Q99733 375 aaKnown RBP12.71□□□□□ -0.37
USP11-208ENST00000480104 ACE2Q9BYF1 805 aaPredicted RBP12.71□□□□□ -0.37
USP11-208ENST00000480104 TRIM9Q9C026 710 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms