RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 CPA6Q8N4T0 437 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 CCDC26Q8TAB7 109 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 SH3RF2Q8TEC5 729 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 KAT5Q92993 513 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 SLC22A12Q96S37 553 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 CYP2S1Q96SQ9 504 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 CRACR2AQ9BSW2 395 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 RNF38Q9H0F5 515 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 HSD3B7Q9H2F3 369 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 LRRC4Q9HBW1 653 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 LTB4R2Q9NPC1 389 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 SIX2Q9NPC8 291 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 HEBP1Q9NRV9 189 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 OLA1Q9NTK5 396 aaKnown RBP13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 FANCLQ9NW38 375 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 GMIPQ9P107 970 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 DLGAP2Q9P1A6 1054 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 CHORDC1Q9UHD1 332 aaPredicted RBP13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 CCL26Q9Y258 94 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 PIAS3Q9Y6X2 628 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 PATJQ8NI35 1801 aa13.01□□□□□ -0.33
CLCNKA-205ENST00000477360 CACNA1HO95180 2353 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 OBSL1O75147 1896 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 KIF26AQ9ULI4 1882 aaPredicted RBP13□□□□□ -0.33
CLCNKA-205ENST00000477360 LEFTY2O00292 366 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 GALR2O43603 387 aaPredicted RBP13□□□□□ -0.33
CLCNKA-205ENST00000477360 NFATC1O95644 943 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 COL9A1P20849 921 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 ACADSBP45954 432 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 TKTL1P51854 596 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 SNX16P57768 344 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 PTK2Q05397 1052 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 KRT31Q15323 416 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 DGKKQ5KSL6 1271 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 KLHDC7AQ5VTJ3 777 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 GPRIN1Q7Z2K8 1008 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 FAM71AQ8IYT1 594 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 ZNF687Q8N1G0 1237 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 TMEM105Q8N8V8 129 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 FLCNQ8NFG4 579 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 ZNF606Q8WXB4 792 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 TFAP2BQ92481 460 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 NAA15Q9BXJ9 866 aaKnown RBP13□□□□□ -0.33
CLCNKA-205ENST00000477360 STK33Q9BYT3 514 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 LHX5Q9H2C1 402 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 TMEM51Q9NW97 253 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 DUS2Q9NX74 493 aaKnown RBP13□□□□□ -0.33
CLCNKA-205ENST00000477360 DNMT3LQ9UJW3 386 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 PCDHGC3Q9UN70 934 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 ZNF510Q9Y2H8 683 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 CPQQ9Y646 472 aa13□□□□□ -0.33
CLCNKA-205ENST00000477360 SHISA7A6NL88 538 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 LGALS16A8MUM7 142 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 BECN2A8MW95 431 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 SPECC1L-ADORA2AF8WAN1 911 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 ABL1P00519 1130 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 RARGP13631 454 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 KRT5P13647 590 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 UCHL3P15374 230 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 GNA15P30679 374 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 CTHP32929 405 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 EIF2DP41214 584 aaKnown RBP12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 GPD2P43304 727 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 IFNAR2P48551 515 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 KPNA1P52294 538 aaPredicted RBP12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 PTPN5P54829 565 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 COG7P83436 770 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 KCNMA1Q12791 1236 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 LRRC32Q14392 662 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 EML3Q32P44 896 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 HTR3DQ70Z44 454 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 FMNL3Q8IVF7 1028 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 SIX6OS1Q8N1H7 587 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 FAM3CQ92520 227 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 ZFRQ96KR1 1074 aaKnown RBP12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 ERGIC2Q96RQ1 377 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 ZSWIM1Q9BR11 485 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 SLC4A5Q9BY07 1137 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 IRX2Q9BZI1 471 aaPredicted RBP12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 SMG9Q9H0W8 520 aaKnown RBP12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 HPS4Q9NQG7 708 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 ABCC13Q9NSE7 274 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 DNAJC12Q9UKB3 198 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 COL4A2P08572 1712 aa12.99□□□□□ -0.33
CLCNKA-205ENST00000477360 ZNF638Q14966 1978 aaKnown RBP12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 ANAPC1Q9H1A4 1944 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 FAM170BA6NMN3 283 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 STK25O00506 426 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 TRDMT1O14717 391 aaKnown RBP12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 CYP26A1O43174 497 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 MBL2P11226 248 aaPredicted RBP12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 CDK11BP21127 795 aaKnown RBP12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 COPB1P53618 953 aaKnown RBP12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 VCPP55072 806 aaKnown RBP12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 TPM4P67936 248 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 IFRD2Q12894 506 aaPredicted RBP12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 PREPLQ4J6C6 727 aaPredicted RBP12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 SCD5Q86SK9 330 aa12.98□□□□□ -0.33
CLCNKA-205ENST00000477360 TMEM110Q86TL2 294 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms