RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 VPS52Q8N1B4 723 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 MRPL43Q8N983 215 aaKnown RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 RNF169Q8NCN4 708 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 HDAC7Q8WUI4 952 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 ANKRD7Q92527 254 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 STAMQ92783 540 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 IGSF21Q96ID5 467 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 PKNOX2Q96KN3 472 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 CLIC6Q96NY7 704 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 FAM193BQ96PV7 902 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 FDXACB1Q9BRP7 624 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 TRIM6Q9C030 488 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 XPO4Q9C0E2 1151 aaKnown RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 MKRN2Q9H000 416 aaKnown RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 ADAM7Q9H2U9 754 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 IFT122Q9HBG6 1241 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 TUFT1Q9NNX1 390 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 GCM1Q9NP62 436 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 PRMT7Q9NVM4 692 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 GFOD1Q9NXC2 390 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 MUTYHQ9UIF7 546 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 GPR160Q9UJ42 338 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 INPP5FQ9Y2H2 1132 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 PCDHB2Q9Y5E7 798 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 HCFC2Q9Y5Z7 792 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 TSC2P49815 1807 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 PATJQ8NI35 1801 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 TPRP12270 2363 aaKnown RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 MYO15AQ9UKN7 3530 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 LAD1O00515 517 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 N4BP3O15049 544 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 LINC01565O15544 149 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 CTIFO43310 598 aaKnown RBP4.59□□□□□ -1.67
VPS13D-206ENST00000476045 CUTAO60888 179 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 SF3B1O75533 1304 aaKnown RBP eCLIP4.59□□□□□ -1.67
VPS13D-206ENST00000476045 CSPG5O95196 566 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 STBD1O95210 358 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 GLUD1P00367 558 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 SOD2P04179 222 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 GSNP06396 782 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 POU2F2P09086 479 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 OR52Z1P0C646 297 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 ITGA4P13612 1032 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 VAV1P15498 845 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 PNLIPP16233 465 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 SCP2P22307 547 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 CMA1P23946 247 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 DNAJA1P31689 397 aaKnown RBP4.59□□□□□ -1.67
VPS13D-206ENST00000476045 SYKP43405 635 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 GLUD2P49448 558 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 RARRES1P49788 294 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 EFNA5P52803 228 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 GSDMDP57764 484 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 ZXDAP98168 799 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 ARID5AQ03989 594 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 DSC1Q08554 894 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 DRP2Q13474 957 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 PNOCQ13519 176 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 NCAPHQ15003 741 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 SLC39A14Q15043 492 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 PTPAQ15257 358 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 FAM187BQ17R55 369 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 DCAF4L1Q3SXM0 396 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 HSF5Q4G112 596 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-206ENST00000476045 XKR9Q5GH70 373 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 SPECC1Q5M775 1068 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 ARMCX5Q6P1M9 558 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 SLC27A1Q6PCB7 646 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 SYCE2Q6PIF2 218 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 SPAG17Q6Q759 2223 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 SHC4Q6S5L8 630 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 OTOP3Q7RTS5 596 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 MRPL10Q7Z7H8 261 aaKnown RBP4.59□□□□□ -1.67
VPS13D-206ENST00000476045 CABP7Q86V35 215 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 ZDHHC14Q8IZN3 488 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 CCAR2Q8N163 923 aaKnown RBP4.59□□□□□ -1.67
VPS13D-206ENST00000476045 RNF149Q8NC42 400 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 VN1R2Q8NFZ6 395 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 NUP210Q8TEM1 1887 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-206ENST00000476045 HAS1Q92839 578 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 UIMC1Q96RL1 719 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 RPS6KC1Q96S38 1066 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 ADPGKQ9BRR6 497 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 TIPINQ9BVW5 301 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 CSRNP2Q9H175 543 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 FOXP1Q9H334 677 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-206ENST00000476045 TNFRSF12AQ9NP84 129 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 MRPL17Q9NRX2 175 aaKnown RBP4.59□□□□□ -1.67
VPS13D-206ENST00000476045 ZDHHC7Q9NXF8 308 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 DBR1Q9UK59 544 aaKnown RBP4.59□□□□□ -1.67
VPS13D-206ENST00000476045 ACSL6Q9UKU0 697 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 PCDHA12Q9UN75 941 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 KCNJ14Q9UNX9 436 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 SORCS3Q9UPU3 1222 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 GIT1Q9Y2X7 761 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 DMXL1Q9Y485 3027 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 PAXBP1Q9Y5B6 917 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 FHOD1Q9Y613 1164 aa4.59□□□□□ -1.67
VPS13D-206ENST00000476045 ZFP37Q9Y6Q3 630 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms