RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 CBWD3Q5JTY5 395 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 CBWD5Q5RIA9 395 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 HECTD3Q5T447 861 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 HEATR6Q6AI08 1181 aaKnown RBP9.97□□□□□ -0.81
PDPN-204ENST00000475043 FSTL4Q6MZW2 842 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 FILIP1Q7Z7B0 1213 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 SYNPOQ8N3V7 929 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 ZBTB44Q8NCP5 570 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 ZMIZ2Q8NF64 920 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 OVCA2Q8WZ82 227 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 CHFRQ96EP1 664 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 DHTKD1Q96HY7 919 aaPredicted RBP9.97□□□□□ -0.81
PDPN-204ENST00000475043 HEXIM2Q96MH2 286 aaKnown RBP9.97□□□□□ -0.81
PDPN-204ENST00000475043 HNRNPABQ99729 332 aaKnown RBP9.97□□□□□ -0.81
PDPN-204ENST00000475043 P2RY13Q9BPV8 354 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 FBXO44Q9H4M3 255 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 CSNK1G1Q9HCP0 422 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 GMIPQ9P107 970 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 CFAP97Q9P2B7 532 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 ARMCX3Q9UH62 379 aaPredicted RBP9.97□□□□□ -0.81
PDPN-204ENST00000475043 VPS13AQ96RL7 3174 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 TRDMT1O14717 391 aaKnown RBP9.96□□□□□ -0.82
PDPN-204ENST00000475043 RNF40O75150 1001 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 OLFM2O95897 454 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 EGFP01133 1207 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 ACO1P21399 889 aaKnown RBP9.96□□□□□ -0.82
PDPN-204ENST00000475043 DRD1P21728 446 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 PPP1R2P41236 205 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 CCDC40Q4G0X9 1142 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 PPP1R26Q5T8A7 1209 aaPredicted RBP9.96□□□□□ -0.82
PDPN-204ENST00000475043 NAIF1Q69YI7 327 aaPredicted RBP9.96□□□□□ -0.82
PDPN-204ENST00000475043 CLEC20AQ6ZU45 233 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 DDX42Q86XP3 938 aaKnown RBP eCLIP9.96□□□□□ -0.82
PDPN-204ENST00000475043 ELOA2Q8IYF1 753 aaPredicted RBP9.96□□□□□ -0.82
PDPN-204ENST00000475043 TTC39CQ8N584 583 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 WHAMMQ8TF30 809 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 RUBCNQ92622 972 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 CD101Q93033 1021 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 ARID3AQ99856 593 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 CCSER2Q9H7U1 834 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 FBRSL1Q9HCM7 1045 aaKnown RBP9.96□□□□□ -0.82
PDPN-204ENST00000475043 TLR8Q9NR97 1041 aaKnown RBP9.96□□□□□ -0.82
PDPN-204ENST00000475043 CISHQ9NSE2 258 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 COMMD8Q9NX08 183 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 NCDNQ9UBB6 729 aa9.96□□□□□ -0.82
PDPN-204ENST00000475043 CHURC1-FNTBB4DL54 471 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 SLC9A3R1O14745 358 aaPredicted RBP9.95□□□□□ -0.82
PDPN-204ENST00000475043 TLR5O60602 858 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 ATG13O75143 517 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 IRF1P10914 325 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 TDGF1P13385 188 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 FNTBP49356 437 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 MCCD1P59942 119 aaPredicted RBP9.95□□□□□ -0.82
PDPN-204ENST00000475043 LRMPQ12912 555 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 SNX30Q5VWJ9 437 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 PKN3Q6P5Z2 889 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 GPRIN1Q7Z2K8 1008 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 ZC3H3Q8IXZ2 948 aaKnown RBP9.95□□□□□ -0.82
PDPN-204ENST00000475043 ADGRG2Q8IZP9 1017 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 DCLK2Q8N568 766 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 SUMF1Q8NBK3 374 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 NELFBQ8WX92 580 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 NELL1Q92832 810 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 SLC35C1Q96A29 364 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 TMEM176AQ96HP8 235 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 FAXDC2Q96IV6 333 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 CEP63Q96MT8 703 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 METTL14Q9HCE5 456 aaKnown RBP9.95□□□□□ -0.82
PDPN-204ENST00000475043 C2orf42Q9NWW7 574 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 IL37Q9NZH6 218 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 RAB23Q9ULC3 237 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 CTNND2Q9UQB3 1225 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 SH3BP1Q9Y3L3 701 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 KIAA1549LQ6ZVL6 1849 aa9.95□□□□□ -0.82
PDPN-204ENST00000475043 CACNA1HO95180 2353 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 ATG2BQ96BY7 2078 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 E2F8A0AVK6 867 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 BICDL2A1A5D9 508 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 FAM92AA1XBS5 289 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 HHLA1C9JL84 531 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 K7ESF4 209 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 CYP26A1O43174 497 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 LILRB5O75023 590 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 CYP17A1P05093 508 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 BMP6P22004 513 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 HOXC13P31276 330 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 PXNP49023 591 aaPredicted RBP9.94□□□□□ -0.82
PDPN-204ENST00000475043 FMO5P49326 533 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 PGFP49763 221 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 TUBP50607 506 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 RAD23BP54727 409 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 STX17P56962 302 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 SLC8A3P57103 927 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 UBE2HP62256 183 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 DMWDQ09019 674 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 CUL2Q13617 745 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 MORC3Q14149 939 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 DHCR24Q15392 516 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 CAMK4Q16566 473 aa9.94□□□□□ -0.82
PDPN-204ENST00000475043 LPAL2Q16609 132 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms