RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 AP3D1O14617 1153 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 TOX4O94842 621 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 MEF2AQ02078 507 aaPredicted RBP5.3□□□□□ -1.56
GCFC2-205ENST00000470197 RINT1Q6NUQ1 792 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 CLEC14AQ86T13 490 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 AMIGO3Q86WK7 504 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 KLHL14Q9P2G3 628 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 CNTN6Q9UQ52 1028 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 HPSEQ9Y251 543 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 IL11P20809 199 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 CDC16Q13042 620 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 HABP2Q14520 560 aaPredicted RBP5.3□□□□□ -1.56
GCFC2-205ENST00000470197 FAM69AQ5T7M9 428 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 TTC39CQ8N584 583 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 SYTL4Q96C24 671 aaPredicted RBP5.3□□□□□ -1.56
GCFC2-205ENST00000470197 NDST4Q9H3R1 872 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 C5AR2Q9P296 337 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 ZDHHC8Q9ULC8 765 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 ACEP12821 1306 aa5.3□□□□□ -1.56
GCFC2-205ENST00000470197 F9P00740 461 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 GCP02774 474 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 SRGAP2BP0DMP2 458 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 MUTP22033 750 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 FDXRP22570 491 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 FBLN1P23142 703 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 GARSP41250 739 aaKnown RBP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 SMAD4Q13485 552 aaKnown RBP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 PKN2Q16513 984 aaKnown RBP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 TBR1Q16650 682 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 C19orf54Q5BKX5 351 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 UTP14CQ5TAP6 766 aaKnown RBP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 XYLT1Q86Y38 959 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 KCTD6Q8NC69 237 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 FLCNQ8NFG4 579 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 ELP4Q96EB1 424 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 CYFIP2Q96F07 1278 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 CPEB1Q9BZB8 566 aaKnown RBP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 TMEM140Q9NV12 185 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 SIDT1Q9NXL6 827 aaKnown RBP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 DBR1Q9UK59 544 aaKnown RBP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 SNX11Q9Y5W9 270 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 IQGAP3Q86VI3 1631 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 SPATA31A1Q5TZJ5 1347 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 FITM1A5D6W6 292 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 DKC1O60832 514 aaKnown RBP eCLIP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 WFS1O76024 890 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 TGFB1P01137 390 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 HGFP14210 728 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 TM4SF1P30408 202 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 AARSP49588 968 aaKnown RBP eCLIP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 ZNF134P52741 427 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 MLLT6P55198 1093 aaPredicted RBP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 ITGA1P56199 1179 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 CREB5Q02930 508 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 CUL4AQ13619 759 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 SLC29A2Q14542 456 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 MSMPQ1L6U9 139 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 RTL10Q7L3V2 364 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 PPP1R32Q7Z5V6 425 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 UNC5BQ8IZJ1 945 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 SRBD1Q8N5C6 995 aaKnown RBP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 ZBTB45Q96K62 511 aaPredicted RBP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 KLHL32Q96NJ5 620 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 MESP1Q9BRJ9 268 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 MRI1Q9BV20 369 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 FTOQ9C0B1 505 aaKnown RBP eCLIP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 RBM8AQ9Y5S9 174 aaKnown RBP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 MYO5BQ9ULV0 1848 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 CCDC78A2IDD5 438 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 ANP32CO43423 234 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 PHF2O75151 1096 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 TGDSO95455 350 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 CNPP09543 421 aaKnown RBP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 RASA2Q15283 850 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 MED22Q15528 200 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 TRIM60Q495X7 471 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 SLC16A10Q8TF71 515 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 BCL7CQ8WUZ0 217 aaPredicted RBP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 BRD8Q9H0E9 1235 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 DLL4Q9NR61 685 aa5.29□□□□□ -1.56
GCFC2-205ENST00000470197 ZNF215Q9UL58 517 aaPredicted RBP5.29□□□□□ -1.56
GCFC2-205ENST00000470197 NEXMIFQ5QGS0 1516 aa5.28□□□□□ -1.56
GCFC2-205ENST00000470197 BTBD11A6QL63 1104 aa5.28□□□□□ -1.56
GCFC2-205ENST00000470197 M0QZQ0 153 aa5.28□□□□□ -1.56
GCFC2-205ENST00000470197 SLC7A4O43246 635 aa5.28□□□□□ -1.56
GCFC2-205ENST00000470197 SLC43A1O75387 559 aa5.28□□□□□ -1.56
GCFC2-205ENST00000470197 PABPC1LQ4VXU2 614 aaKnown RBP5.28□□□□□ -1.56
GCFC2-205ENST00000470197 ZNF529Q6P280 563 aa5.28□□□□□ -1.56
GCFC2-205ENST00000470197 CARNMT1Q8N4J0 409 aa5.28□□□□□ -1.56
GCFC2-205ENST00000470197 CCDC150Q8NCX0 1101 aa5.28□□□□□ -1.56
GCFC2-205ENST00000470197 PDZD8Q8NEN9 1154 aa5.28□□□□□ -1.56
GCFC2-205ENST00000470197 EIF2B4Q9UI10 523 aaKnown RBP5.28□□□□□ -1.56
GCFC2-205ENST00000470197 RRP7AQ9Y3A4 280 aaKnown RBP5.28□□□□□ -1.56
GCFC2-205ENST00000470197 SLIT2O94813 1529 aa5.28□□□□□ -1.56
GCFC2-205ENST00000470197 NPIPB15A6NHN6 443 aaPredicted RBP5.28□□□□□ -1.56
GCFC2-205ENST00000470197 CBFA2T3O75081 653 aa5.28□□□□□ -1.56
GCFC2-205ENST00000470197 BEST1O76090 585 aa5.28□□□□□ -1.56
GCFC2-205ENST00000470197 ALOX12P18054 663 aa5.28□□□□□ -1.56
GCFC2-205ENST00000470197 EPHA8P29322 1005 aaPredicted RBP5.28□□□□□ -1.56
GCFC2-205ENST00000470197 ALDH18A1P54886 795 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms