RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 TEAD2Q15562 447 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 PTPN21Q16825 1174 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 CLEC16AQ2KHT3 1053 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 TAF3Q5VWG9 929 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 GPRIN1Q7Z2K8 1008 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 SCUBE3Q8IX30 993 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 CELF5Q8N6W0 485 aaKnown RBP13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 ANP32BQ92688 251 aaKnown RBP13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 TCEAL4Q96EI5 215 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 RPGRIP1Q96KN7 1286 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 SLC46A2Q9BY10 475 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 ULBP1Q9BZM6 244 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 SLITRK6Q9H5Y7 841 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 GRPEL1Q9HAV7 217 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 ZFP14Q9HCL3 533 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 TULP2O00295 520 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 ABL1P00519 1130 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 CALCAP01258 141 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 CALB1P05937 261 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 LCP1P13796 627 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 CEBPBP17676 345 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 ATP5C1P36542 298 aaKnown RBP13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 YWHAGP61981 247 aaKnown RBP eCLIP13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 YWHAZP63104 245 aaKnown RBP13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 C1QBPQ07021 282 aaKnown RBP13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 GOLGA8FQ08AF8 430 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 GOLGA8DPQ0D2H9 430 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 IFRD2Q12894 506 aaPredicted RBP13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 BSPRYQ5W0U4 402 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 BTBD8Q5XKL5 378 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 HGSNATQ68CP4 663 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 ACAD10Q6JQN1 1059 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 PASD1Q8IV76 773 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 MAB21L3Q8N8X9 362 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 ZSCAN18Q8TBC5 510 aaPredicted RBP13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 SLC20A1Q8WUM9 679 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 ELSPBP1Q96BH3 223 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 MCRS1Q96EZ8 462 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 TRIM11Q96F44 468 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 ASB16Q96NS5 453 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 PANX2Q96RD6 677 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 MYADMQ96S97 322 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 CPXM1Q96SM3 734 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 NACA2Q9H009 215 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 ABHD10Q9NUJ1 306 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 TDP1Q9NUW8 608 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 RRN3Q9NYV6 651 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 GMIPQ9P107 970 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 DNMT3LQ9UJW3 386 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 NAGPAQ9UK23 515 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 ARHGAP26Q9UNA1 814 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 COL6A3P12111 3177 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 PRUNE2Q8WUY3 3088 aa13.25□□□□□ -0.29
SPTLC1-204ENST00000469778 E5RJQ4 531 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 DPYSL4O14531 572 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 TLR5O60602 858 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 HSF2BPO75031 334 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 RTN2O75298 545 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 TADA3O75528 432 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 GABBR2O75899 941 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 CKMP06732 381 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 CFHP08603 1231 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 RARGP13631 454 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 RGS7P49802 495 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 GSCP56915 257 aaPredicted RBP13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 COG7P83436 770 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 SLC6A3Q01959 620 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 MTA1Q13330 715 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 MAPK8IP2Q13387 824 aaPredicted RBP13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 TDRD12Q587J7 1177 aaKnown RBP13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 FAM78AQ5JUQ0 283 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 NAA35Q5VZE5 725 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 TXNDC8Q6A555 127 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 ZNF571Q7Z3V5 609 aaPredicted RBP13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 SCD5Q86SK9 330 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 ARID3BQ8IVW6 561 aaPredicted RBP13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 GJD3Q8N144 294 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 SLC30A5Q8TAD4 765 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 RNF139Q8WU17 664 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 DEPDC1BQ8WUY9 529 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 CPA5Q8WXQ8 436 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 POPDC2Q9HBU9 364 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 SEPT11Q9NVA2 429 aaKnown RBP13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 THG1LQ9NWX6 298 aaKnown RBP13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 ADAM22Q9P0K1 906 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 CYTH4Q9UIA0 394 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 CDH22Q9UJ99 828 aa13.24□□□□□ -0.29
SPTLC1-204ENST00000469778 NOTCH4Q99466 2003 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 A0A1W2PQH9 124 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 YJEFN3A6XGL0 299 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 C2CD4DB7Z1M9 353 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 E7ENQ6 273 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 PAPSS1O43252 624 aaPredicted RBP13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 LTFP02788 710 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 MYBL1P10243 752 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 GJA1P17302 382 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 SSTR3P32745 418 aaPredicted RBP13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 GSDMDP57764 484 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 PTPN20Q4JDL3 420 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms