RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 SNF8Q96H20 258 aa12.54□□□□□ -0.4
TNRC6A-204ENST00000462400 WNT8AQ9H1J5 351 aa12.54□□□□□ -0.4
TNRC6A-204ENST00000462400 GOLGA2P5Q9HBQ8 144 aa12.54□□□□□ -0.4
TNRC6A-204ENST00000462400 LRCH1Q9Y2L9 728 aa12.54□□□□□ -0.4
TNRC6A-204ENST00000462400 MKI67P46013 3256 aaKnown RBP12.54□□□□□ -0.4
TNRC6A-204ENST00000462400 SCN10AQ9Y5Y9 1956 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 LMNAP02545 664 aaKnown RBP12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 PYGLP06737 847 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 CD19P15391 556 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 ITIH2P19823 946 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 ZNF132P52740 706 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 NFX1Q12986 1120 aaKnown RBP12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 CUL3Q13618 768 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 TBC1D25Q3MII6 688 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 SNX30Q5VWJ9 437 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 MCOLN2Q8IZK6 566 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 SCG3Q8WXD2 468 aaKnown RBP12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 ITFG2Q969R8 447 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 HPDLQ96IR7 371 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 FAM81BQ96LP2 452 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 C9orf72Q96LT7 481 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 ASB7Q9H672 318 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 SPC25Q9HBM1 224 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 METTL5Q9NRN9 209 aaKnown RBP12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 CACNG4Q9UBN1 327 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 GTF2IRD1Q9UHL9 959 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 LGALS13Q9UHV8 139 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 CDY2AQ9Y6F7 541 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 MEIS3P2A8K0S8 358 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 SMAPO00193 183 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 ASMTLO95671 621 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 SKIP12755 728 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 NSFP46459 744 aaKnown RBP12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 NOMO3P69849 1222 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 RCN1Q15293 331 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 ATG4AQ8WYN0 398 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 IFT43Q96FT9 208 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 TRAIPQ9BWF2 469 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 LRRC19Q9H756 370 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 PCMTD2Q9NV79 361 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 CNTN6Q9UQ52 1028 aa12.53□□□□□ -0.4
TNRC6A-204ENST00000462400 SIGLEC16A6NMB1 481 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 CYP1A1P04798 512 aaPredicted RBP12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 PTPN4P29074 926 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 VEGFBP49765 207 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 CACNA2D1P54289 1103 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 BPIFB4P59827 614 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 DCAF4L1Q3SXM0 396 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 UBXN11Q5T124 520 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 C4orf50Q6ZRC1 276 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 ARHGAP22Q7Z5H3 698 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 C12orf50Q8NA57 414 aaPredicted RBP12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 ARRDC4Q8NCT1 418 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 SH3TC2Q8TF17 1288 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 CD101Q93033 1021 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 SNX27Q96L92 541 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 CHST7Q9NS84 486 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 TJP2Q9UDY2 1190 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 ZFP69BQ9UJL9 534 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 ANAPC5Q9UJX4 755 aa12.52□□□□□ -0.4
TNRC6A-204ENST00000462400 HCRTO43612 131 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 TCEA3O75764 348 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 CYP1A2P05177 515 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 HOXC8P31273 242 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 ADCY8P40145 1251 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 RANBP1P43487 201 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 CRYBB1P53674 252 aaPredicted RBP12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 TWF2Q6IBS0 349 aaKnown RBP12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 DSTYKQ6XUX3 929 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 C10orf82Q8WW14 230 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 NRG4Q8WWG1 115 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 TRAPPC9Q96Q05 1148 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 MIPEPQ99797 713 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 CCDC77Q9BR77 488 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 ELOVL4Q9GZR5 314 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 SRRDQ9UH36 339 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 ANAPC7Q9UJX3 599 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 GTF3C4Q9UKN8 822 aa12.52□□□□□ -0.41
TNRC6A-204ENST00000462400 KRT36O76013 467 aa12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 CHRNA1P02708 482 aa12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 IGFBP6P24592 240 aaPredicted RBP12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 IVDP26440 423 aa12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 MRPS6P82932 125 aaKnown RBP12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 MON1BQ7L1V2 547 aa12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 CCNJLQ8IV13 435 aa12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 RAET1EQ8TD07 263 aa12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 LPIN3Q9BQK8 851 aa12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 UPF3AQ9H1J1 476 aaKnown RBP12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 TRMT13Q9NUP7 481 aaKnown RBP12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 GRID1Q9ULK0 1009 aa12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 ACTL7BQ9Y614 415 aa12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 TRAFD1O14545 582 aaPredicted RBP12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 CAPN9O14815 690 aa12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 EDF1O60869 148 aaKnown RBP12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 GSTA2P09210 222 aa12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 ATF2P15336 505 aa12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 SERPINB4P48594 390 aa12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 APLP1P51693 650 aa12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 AFF1P51825 1210 aaKnown RBP12.51□□□□□ -0.41
TNRC6A-204ENST00000462400 CENPCQ03188 943 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms