RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 GIPC3Q8TF64 312 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 TTC17Q96AE7 1141 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 ZFRQ96KR1 1074 aaKnown RBP10.03□□□□□ -0.8
LINC01940-201ENST00000455228 POP1Q99575 1024 aaKnown RBP10.03□□□□□ -0.8
LINC01940-201ENST00000455228 CCDC77Q9BR77 488 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 GPR88Q9GZN0 384 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 DDX4Q9NQI0 724 aaKnown RBP10.03□□□□□ -0.8
LINC01940-201ENST00000455228 GMIPQ9P107 970 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 SYCE1LA8MT33 242 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 EML1O00423 815 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 RIMBP2O15034 1052 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 GUCY1B2O75343 617 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 TFAP2AP05549 437 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 IL1R1P14778 569 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 IL10P22301 178 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 RFX1P22670 979 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 CXCR2P25025 360 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 SHMT1P34896 483 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 HSPA1LP34931 641 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 MAPKAPK2P49137 400 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 SRP54P61011 504 aaKnown RBP10.03□□□□□ -0.8
LINC01940-201ENST00000455228 POLR2GP62487 172 aaKnown RBP eCLIP10.03□□□□□ -0.8
LINC01940-201ENST00000455228 APOFQ13790 326 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 SQLEQ14534 574 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 MAPRE1Q15691 268 aaKnown RBP10.03□□□□□ -0.8
LINC01940-201ENST00000455228 KYNUQ16719 465 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 CEP78Q5JTW2 689 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 METTL11BQ5VVY1 283 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 METTL2BQ6P1Q9 378 aaKnown RBP10.03□□□□□ -0.8
LINC01940-201ENST00000455228 FAM83AQ86UY5 434 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 LRRTM3Q86VH5 581 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 SIX5Q8N196 739 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 ZNF564Q8TBZ8 553 aaPredicted RBP10.03□□□□□ -0.8
LINC01940-201ENST00000455228 MBOAT7Q96N66 472 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 TTC1Q99614 292 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 NUP85Q9BW27 656 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 PITPNM3Q9BZ71 974 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 PCIF1Q9H4Z3 704 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 TRIM33Q9UPN9 1127 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 APOBEC2Q9Y235 224 aaKnown RBP10.03□□□□□ -0.8
LINC01940-201ENST00000455228 FOXO6A8MYZ6 492 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 CLDN3O15551 220 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 TRMUO75648 421 aaKnown RBP10.03□□□□□ -0.8
LINC01940-201ENST00000455228 ADCY8P40145 1251 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 SCNN1DP51172 638 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 CCR3P51677 355 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 HSP90AA5PQ58FG0 334 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 CORO6Q6QEF8 472 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 FAM47EQ6ZV65 393 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 DYDC2Q96IM9 177 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 DNAJC1Q96KC8 554 aaKnown RBP10.03□□□□□ -0.8
LINC01940-201ENST00000455228 SYT11Q9BT88 431 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 OSBPL6Q9BZF3 934 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 RUBCNLQ9H714 662 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 EMSYQ7Z589 1322 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 ZBTB39O15060 712 aa10.02□□□□□ -0.8
LINC01940-201ENST00000455228 RNASEH1O60930 286 aaKnown RBP10.02□□□□□ -0.8
LINC01940-201ENST00000455228 GAS8O95995 478 aa10.02□□□□□ -0.8
LINC01940-201ENST00000455228 CHEK2O96017 543 aa10.02□□□□□ -0.8
LINC01940-201ENST00000455228 GH1P01241 217 aa10.02□□□□□ -0.8
LINC01940-201ENST00000455228 RBP3P10745 1247 aa10.02□□□□□ -0.8
LINC01940-201ENST00000455228 EEF2P13639 858 aaKnown RBP10.02□□□□□ -0.8
LINC01940-201ENST00000455228 GCLMP48507 274 aa10.02□□□□□ -0.8
LINC01940-201ENST00000455228 MKRN3Q13064 507 aaKnown RBP10.02□□□□□ -0.8
LINC01940-201ENST00000455228 RRP1BQ14684 758 aaKnown RBP10.02□□□□□ -0.8
LINC01940-201ENST00000455228 UGT2A3Q6UWM9 527 aa10.02□□□□□ -0.8
LINC01940-201ENST00000455228 NSMFQ6X4W1 530 aa10.02□□□□□ -0.8
LINC01940-201ENST00000455228 ZNF720Q7Z2F6 126 aa10.02□□□□□ -0.8
LINC01940-201ENST00000455228 HEATR4Q86WZ0 1026 aa10.02□□□□□ -0.8
LINC01940-201ENST00000455228 ZDHHC14Q8IZN3 488 aa10.02□□□□□ -0.8
LINC01940-201ENST00000455228 TTLQ8NG68 377 aa10.02□□□□□ -0.8
LINC01940-201ENST00000455228 SPATA17Q96L03 361 aa10.02□□□□□ -0.8
LINC01940-201ENST00000455228 CDRT15Q96T59 188 aa10.02□□□□□ -0.8
LINC01940-201ENST00000455228 MRPL1Q9BYD6 325 aaKnown RBP10.02□□□□□ -0.8
LINC01940-201ENST00000455228 FRMPD4Q14CM0 1322 aa10.02□□□□□ -0.8
LINC01940-201ENST00000455228 SLURP2P0DP57 97 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 CDH3P22223 829 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 IFNA8P32881 189 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 YARSP54577 528 aaKnown RBP10.02□□□□□ -0.81
LINC01940-201ENST00000455228 STRN3Q13033 797 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 C15orf52Q6ZUT6 534 aaKnown RBP10.02□□□□□ -0.81
LINC01940-201ENST00000455228 KCTD20Q7Z5Y7 419 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 METTL3Q86U44 580 aaKnown RBP10.02□□□□□ -0.81
LINC01940-201ENST00000455228 SATL1Q86VE3 508 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 GALNT13Q8IUC8 556 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 PPM1KQ8N3J5 372 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 OLIG1Q8TAK6 271 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 CKAP2Q8WWK9 683 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 LENG9Q96B70 501 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 MOGAT1Q96PD6 335 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 ZMYM2Q9UBW7 1377 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 FAM196BA6NMK8 535 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 G3V3G9 751 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 SLC9A3R1O14745 358 aaPredicted RBP10.02□□□□□ -0.81
LINC01940-201ENST00000455228 ATF2P15336 505 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 SREBF1P36956 1147 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 HADHBP55084 474 aaKnown RBP10.02□□□□□ -0.81
LINC01940-201ENST00000455228 CCDC58Q4VC31 144 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 DCAF8Q5TAQ9 597 aa10.02□□□□□ -0.81
LINC01940-201ENST00000455228 ZC3H18Q86VM9 953 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms