RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 ZC3H7BQ9UGR2 993 aaKnown RBP11.78□□□□□ -0.52
SYVN1-204ENST00000449943 LNPEPQ9UIQ6 1025 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 EFR3BQ9Y2G0 817 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 MTO1Q9Y2Z2 717 aaKnown RBP11.78□□□□□ -0.52
SYVN1-204ENST00000449943 CCNHP51946 323 aaPredicted RBP11.78□□□□□ -0.52
SYVN1-204ENST00000449943 TTLL4Q14679 1199 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 PPP6R3Q5H9R7 873 aaPredicted RBP11.78□□□□□ -0.52
SYVN1-204ENST00000449943 IER5Q5VY09 327 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 SLC4A11Q8NBS3 891 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 RXFP2Q8WXD0 754 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 FRMD8P1Q9BZ68 369 aaPredicted RBP11.78□□□□□ -0.52
SYVN1-204ENST00000449943 NMUR2Q9GZQ4 415 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 DCLRE1BQ9H816 532 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 KCNK13Q9HB14 408 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 ZFATQ9P243 1243 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 TRAFD1O14545 582 aaPredicted RBP11.77□□□□□ -0.52
SYVN1-204ENST00000449943 NEK3P51956 506 aa11.77□□□□□ -0.52
SYVN1-204ENST00000449943 PRKD1Q15139 912 aaPredicted RBP11.77□□□□□ -0.52
SYVN1-204ENST00000449943 ZC3H12AQ5D1E8 599 aaKnown RBP11.77□□□□□ -0.52
SYVN1-204ENST00000449943 NAIF1Q69YI7 327 aaPredicted RBP11.77□□□□□ -0.52
SYVN1-204ENST00000449943 ANO7Q6IWH7 933 aa11.77□□□□□ -0.52
SYVN1-204ENST00000449943 RSPH3Q86UC2 560 aa11.77□□□□□ -0.52
SYVN1-204ENST00000449943 ARID3BQ8IVW6 561 aaPredicted RBP11.77□□□□□ -0.52
SYVN1-204ENST00000449943 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.77□□□□□ -0.525e-7■■■■■ 91.9
SYVN1-204ENST00000449943 PTCD3Q96EY7 689 aaKnown RBP11.77□□□□□ -0.52
SYVN1-204ENST00000449943 OXNAD1Q96HP4 312 aaPredicted RBP11.77□□□□□ -0.52
SYVN1-204ENST00000449943 ACAP3Q96P50 834 aa11.77□□□□□ -0.52
SYVN1-204ENST00000449943 PCMTD2Q9NV79 361 aa11.77□□□□□ -0.52
SYVN1-204ENST00000449943 ADAMTS5Q9UNA0 930 aa11.77□□□□□ -0.52
SYVN1-204ENST00000449943 WDR81Q562E7 1941 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 ENO4A6NNW6 628 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 H3BRJ5 948 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 CYB561D2O14569 222 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 CAPN9O14815 690 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 NVLO15381 856 aaKnown RBP11.77□□□□□ -0.53
SYVN1-204ENST00000449943 ZBED1O96006 694 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 GPD1P21695 349 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 RBL1P28749 1068 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 ICAM3P32942 547 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 HSDL1Q3SXM5 330 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 ACSBG2Q5FVE4 666 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 C1orf127Q8N9H9 656 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 CCDC110Q8TBZ0 833 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 LHX5Q9H2C1 402 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 NMRK1Q9NWW6 199 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 WDR35Q9P2L0 1181 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 STOML1Q9UBI4 398 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 SIX4Q9UIU6 781 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 RGPD3A6NKT7 1758 aaPredicted RBP11.77□□□□□ -0.53
SYVN1-204ENST00000449943 RGPD4Q7Z3J3 1758 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 FER1L6Q2WGJ9 1857 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 DLDP09622 509 aaKnown RBP11.77□□□□□ -0.53
SYVN1-204ENST00000449943 YWHAZP63104 245 aaKnown RBP11.77□□□□□ -0.53
SYVN1-204ENST00000449943 NOMO1Q15155 1222 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 TTC39BQ5VTQ0 682 aaPredicted RBP11.77□□□□□ -0.53
SYVN1-204ENST00000449943 ENDOVQ8N8Q3 282 aaKnown RBP11.77□□□□□ -0.53
SYVN1-204ENST00000449943 CMASQ8NFW8 434 aaPredicted RBP11.77□□□□□ -0.53
SYVN1-204ENST00000449943 WDR60Q8WVS4 1066 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 TMEM176AQ96HP8 235 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 LRRC42Q9Y546 428 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 TEX264Q9Y6I9 313 aa11.77□□□□□ -0.53
SYVN1-204ENST00000449943 COL11A1P12107 1806 aaPredicted RBP11.77□□□□□ -0.53
SYVN1-204ENST00000449943 PSME4Q14997 1843 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 IGKV6D-21A0A0A0MT36 114 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 HMGCRP04035 888 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 ATP6V1C1P21283 382 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 ETV4P43268 484 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 KDSRQ06136 332 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 CHI3L2Q15782 390 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 JADE1Q6IE81 842 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 SLC26A11Q86WA9 606 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 FNIP1Q8TF40 1166 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 SKA1Q96BD8 255 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 FAM161BQ96MY7 647 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 MINDY3Q9H8M7 445 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 ABLIM1O14639 778 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 PGM1P36871 562 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 ZNF280AP59817 542 aaPredicted RBP11.76□□□□□ -0.53
SYVN1-204ENST00000449943 MXRA7P84157 204 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 THOC5Q13769 683 aaKnown RBP11.76□□□□□ -0.53
SYVN1-204ENST00000449943 MXD4Q14582 209 aaPredicted RBP11.76□□□□□ -0.53
SYVN1-204ENST00000449943 KCNJ11Q14654 390 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 TREML2Q5T2D2 321 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 MROH9Q5TGP6 573 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 SNX30Q5VWJ9 437 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 ZNF354CQ86Y25 554 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 DNERQ8NFT8 737 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 RILPQ96NA2 401 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 TSNARE1Q96NA8 513 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 MMP19Q99542 508 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 CDT1Q9H211 546 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 ELP3Q9H9T3 547 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 TAS2R1Q9NYW7 299 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 ASB14A6NK59 587 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 LACTBL1A8MY62 500 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 E7ENQ6 273 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 HNRNPCL1O60812 293 aaKnown RBP11.76□□□□□ -0.53
SYVN1-204ENST00000449943 KRT37O76014 449 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 TOP3BO95985 862 aaKnown RBP11.76□□□□□ -0.53
SYVN1-204ENST00000449943 LMNAP02545 664 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms