RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 CCDC117Q8IWD4 279 aaPredicted RBP2.95□□□□□ -1.94
LINC00393-201ENST00000443621 KLHDC8BQ8IXV7 354 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 COLGALT2Q8IYK4 626 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 RNF168Q8IYW5 571 aaPredicted RBP2.95□□□□□ -1.94
LINC00393-201ENST00000443621 PIAS4Q8N2W9 510 aaPredicted RBP2.95□□□□□ -1.94
LINC00393-201ENST00000443621 ALLCQ8N6M5 410 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 KCTD6Q8NC69 237 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF784Q8NCA9 323 aaPredicted RBP2.95□□□□□ -1.94
LINC00393-201ENST00000443621 MCUQ8NE86 351 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 PDZD8Q8NEN9 1154 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 CD99L2Q8TCZ2 262 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 RXFP2Q8WXD0 754 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 SCG3Q8WXD2 468 aaKnown RBP2.95□□□□□ -1.94
LINC00393-201ENST00000443621 KRT35Q92764 455 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 P3H4Q92791 437 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 WNT8BQ93098 351 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 CENPTQ96BT3 561 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 SNF8Q96H20 258 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 MS4A14Q96JA4 679 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 CFAP57Q96MR6 1250 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 SERPINB12Q96P63 405 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 MCEEQ96PE7 176 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 FAM193BQ96PV7 902 aaPredicted RBP2.95□□□□□ -1.94
LINC00393-201ENST00000443621 RNF157Q96PX1 679 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 TWNKQ96RR1 684 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 ZIC5Q96T25 663 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 RUFY1Q96T51 708 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 GAD1Q99259 594 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 PKMYT1Q99640 499 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 SYT15Q9BQS2 421 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 RHOXF2Q9BQY4 288 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 CCDC77Q9BR77 488 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 MRPL45Q9BRJ2 306 aaKnown RBP2.95□□□□□ -1.94
LINC00393-201ENST00000443621 MAK16Q9BXY0 300 aaKnown RBP2.95□□□□□ -1.94
LINC00393-201ENST00000443621 RNF39Q9H2S5 420 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 ZWILCHQ9H900 591 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 CNOT10Q9H9A5 744 aaKnown RBP2.95□□□□□ -1.94
LINC00393-201ENST00000443621 SSU72Q9NP77 194 aaKnown RBP2.95□□□□□ -1.94
LINC00393-201ENST00000443621 DMAP1Q9NPF5 467 aaPredicted RBP2.95□□□□□ -1.94
LINC00393-201ENST00000443621 ACP6Q9NPH0 428 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.95□□□□□ -1.94
LINC00393-201ENST00000443621 CHST7Q9NS84 486 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 HAUS2Q9NVX0 235 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF446Q9NWS9 450 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 WBP1LQ9NX94 342 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 DDX43Q9NXZ2 648 aaKnown RBP2.95□□□□□ -1.94
LINC00393-201ENST00000443621 PAK5Q9P286 719 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 TUBGCP4Q9UGJ1 667 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 CYTH4Q9UIA0 394 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 FBXW11Q9UKB1 542 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 ADAM28Q9UKQ2 775 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 HPCAL4Q9UM19 191 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 POLIQ9UNA4 740 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 PACSIN2Q9UNF0 486 aaPredicted RBP2.95□□□□□ -1.94
LINC00393-201ENST00000443621 TFR2Q9UP52 801 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 GINS2Q9Y248 185 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 PCDHB7Q9Y5E2 793 aa2.95□□□□□ -1.94
LINC00393-201ENST00000443621 PLXNA3P51805 1871 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 FNDC1Q4ZHG4 1894 aaPredicted RBP2.94□□□□□ -1.94
LINC00393-201ENST00000443621 MICAL3Q7RTP6 2002 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 MAGEB16A2A368 324 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 GOLGA6CA6NDK9 693 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 HHLA1C9JL84 531 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 E7EVH7 732 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 H0YGN5 161 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 H3BRJ5 948 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 DNALI1O14645 258 aaPredicted RBP2.94□□□□□ -1.94
LINC00393-201ENST00000443621 TNFRSF10BO14763 440 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 CAPN9O14815 690 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 KIAA0355O15063 1070 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 ALOX15BO15296 676 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 TP73O15350 636 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 FGF10O15520 208 aaPredicted RBP2.94□□□□□ -1.94
LINC00393-201ENST00000443621 TTI1O43156 1089 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 CACNG3O60359 315 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 CST8O60676 142 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 OPHN1O60890 802 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 SHOX2O60902 331 aaPredicted RBP2.94□□□□□ -1.94
LINC00393-201ENST00000443621 CDH16O75309 829 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 CSDE1O75534 798 aaKnown RBP2.94□□□□□ -1.94
LINC00393-201ENST00000443621 SASH3O75995 380 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 STK10O94804 968 aaKnown RBP2.94□□□□□ -1.94
LINC00393-201ENST00000443621 PAPLNO95428 1278 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 FGF19O95750 216 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 TTC4O95801 387 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 SYF2O95926 243 aaKnown RBP2.94□□□□□ -1.94
LINC00393-201ENST00000443621 AGTP01019 485 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 LTFP02788 710 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 CFHP08603 1231 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 POU2F2P09086 479 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 MYZAPP0CAP1 466 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 GOLGA6DP0CG33 693 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 GHRP10912 638 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 ATF2P15336 505 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 ELNP15502 786 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 TPSB2P20231 275 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 MX2P20592 715 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 FGFR4P22455 802 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 FGFR3P22607 806 aa2.94□□□□□ -1.94
LINC00393-201ENST00000443621 CES1P23141 567 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms