RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 ZSCAN1Q8NBB4 408 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 TSTD1Q8NFU3 115 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 XPO6Q96QU8 1125 aaKnown RBP8.24□□□□□ -1.09
CD44-211ENST00000442151 TSG101Q99816 390 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 VPS45Q9NRW7 570 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 WDR35Q9P2L0 1181 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 CPQQ9Y646 472 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 WNT6Q9Y6F9 365 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 ZFHX2Q9C0A1 2572 aaPredicted RBP8.24□□□□□ -1.09
CD44-211ENST00000442151 SPTBN4Q9H254 2564 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 FAM237AA0A1B0GTK4 181 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 A0A1B0GVL5 298 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 C2orf78A6NCI8 922 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 LRRIQ3A6PVS8 624 aaPredicted RBP8.23□□□□□ -1.09
CD44-211ENST00000442151 CETN3O15182 167 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 ACTN4O43707 911 aaKnown RBP8.23□□□□□ -1.09
CD44-211ENST00000442151 AP1G2O75843 785 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 EPN2O95208 641 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 SMC2O95347 1197 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 ZNF806P0C7X5 589 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 FAM200BP0CF97 657 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 RALAP11233 206 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 GRIA2P42262 883 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 PIK3CAP42336 1068 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 ATXN1P54253 815 aaKnown RBP8.23□□□□□ -1.09
CD44-211ENST00000442151 STK4Q13043 487 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 DMC1Q14565 340 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 Q6ZS52 159 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 GUF1Q8N442 669 aaKnown RBP8.23□□□□□ -1.09
CD44-211ENST00000442151 GLIS3Q8NEA6 775 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 RPLP0P6Q8NHW5 317 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 SPACA7Q96KW9 195 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 NT5C1AQ9BXI3 368 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 XYLT2Q9H1B5 865 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 PNPLA8Q9NP80 782 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 IL37Q9NZH6 218 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 DACH1Q9UI36 760 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 PCDHA5Q9Y5H7 936 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 PTPRJQ12913 1337 aa8.23□□□□□ -1.09
CD44-211ENST00000442151 A0A0A0MRY4 1105 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 KLRC4O43908 158 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 TADA3O75528 432 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 OLFM2O95897 454 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 OAS1P00973 400 aaKnown RBP8.22□□□□□ -1.09
CD44-211ENST00000442151 EPB41P11171 864 aaKnown RBP8.22□□□□□ -1.09
CD44-211ENST00000442151 ATP5C1P36542 298 aaKnown RBP8.22□□□□□ -1.09
CD44-211ENST00000442151 PLA2G4AP47712 749 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 ADAM9Q13443 819 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 STIM1Q13586 685 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 DHCR24Q15392 516 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 EDRF1Q3B7T1 1238 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 SPDYCQ5MJ68 293 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 SV2AQ7L0J3 742 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 FILIP1Q7Z7B0 1213 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 FAM35AQ86V20 835 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 FAM186BQ8IYM0 893 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 USP33Q8TEY7 942 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 HNRNPABQ99729 332 aaKnown RBP8.22□□□□□ -1.09
CD44-211ENST00000442151 UBXN6Q9BZV1 441 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 DCLK3Q9C098 648 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 ZNF518BQ9C0D4 1074 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 LINC00597Q9H2U6 94 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 KCTD10Q9H3F6 313 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 CFAP97Q9P2B7 532 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 DEC1Q9P2X7 70 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 HPSEQ9Y251 543 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 F5P12259 2224 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 DENND4CQ5VZ89 1909 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 TBC1D3BA6NDS4 549 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 ASS1P00966 412 aaKnown RBP8.22□□□□□ -1.09
CD44-211ENST00000442151 HLA-DRAP01903 254 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 ADH5P11766 374 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 NR2F2P24468 414 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 RAP1GAPP47736 663 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 CDR1P51861 262 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 NDST1P52848 882 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 CDH8P55286 799 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 NUCB2P80303 420 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 CETN1Q12798 172 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 IFRD2Q12894 506 aaPredicted RBP8.22□□□□□ -1.09
CD44-211ENST00000442151 LPAL2Q16609 132 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 KRT39Q6A163 491 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 KLHDC10Q6PID8 442 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 KRBA2Q6ZNG9 492 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 RABEPKQ7Z6M1 372 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 ACOT1Q86TX2 421 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 ZNF276Q8N554 614 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 CHFRQ96EP1 664 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 CYFIP2Q96F07 1278 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 SLC22A12Q96S37 553 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 ARRDC1-AS1Q9H2J1 176 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 TMEM8AQ9HCN3 771 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 CSNK1G1Q9HCP0 422 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 ARHGEF4Q9NR80 690 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 CHORDC1Q9UHD1 332 aaPredicted RBP8.22□□□□□ -1.09
CD44-211ENST00000442151 MMP17Q9ULZ9 603 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 SCML2Q9UQR0 700 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 COL4A2P08572 1712 aa8.22□□□□□ -1.09
CD44-211ENST00000442151 RIF1Q5UIP0 2472 aaKnown RBP8.21□□□□□ -1.1
CD44-211ENST00000442151 VPS13AQ96RL7 3174 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms