RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 SLC5A3P53794 718 aa21.14■□□□□ 0.97
UBE2F-215ENST00000441728 MAP7D1Q3KQU3 841 aa21.14■□□□□ 0.97
UBE2F-215ENST00000441728 GRAMD4Q6IC98 578 aa21.14■□□□□ 0.97
UBE2F-215ENST00000441728 SCARA5Q6ZMJ2 495 aa21.14■□□□□ 0.97
UBE2F-215ENST00000441728 FRMD1Q8N878 549 aa21.14■□□□□ 0.97
UBE2F-215ENST00000441728 SCFD1Q8WVM8 642 aa21.14■□□□□ 0.97
UBE2F-215ENST00000441728 XPO6Q96QU8 1125 aaKnown RBP21.14■□□□□ 0.97
UBE2F-215ENST00000441728 KCNK16Q96T55 309 aa21.14■□□□□ 0.97
UBE2F-215ENST00000441728 COMMD8Q9NX08 183 aa21.14■□□□□ 0.97
UBE2F-215ENST00000441728 CGNQ9P2M7 1197 aaKnown RBP21.14■□□□□ 0.97
UBE2F-215ENST00000441728 MBD1Q9UIS9 605 aaPredicted RBP21.14■□□□□ 0.97
UBE2F-215ENST00000441728 LSM7Q9UK45 103 aaKnown RBP21.14■□□□□ 0.97
UBE2F-215ENST00000441728 RALYQ9UKM9 306 aaKnown RBP21.14■□□□□ 0.97
UBE2F-215ENST00000441728 NME7Q9Y5B8 376 aa21.14■□□□□ 0.97
UBE2F-215ENST00000441728 OPHN1O60890 802 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 ADAM23O75077 832 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 ZNF217O75362 1048 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 AP1G2O75843 785 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 ITPKAP23677 461 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 NTSR1P30989 418 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 WASP42768 502 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 NASPP49321 788 aaPredicted RBP21.13■□□□□ 0.97
UBE2F-215ENST00000441728 TUBP50607 506 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 AP3M2P53677 418 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 SIM1P81133 766 aaPredicted RBP21.13■□□□□ 0.97
UBE2F-215ENST00000441728 MESP2Q0VG99 397 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 BBS7Q8IWZ6 715 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 CHPFQ8IZ52 775 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 DEFB119Q8N690 84 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 TERB1Q8NA31 727 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 KDF1Q8NAX2 398 aaPredicted RBP21.13■□□□□ 0.97
UBE2F-215ENST00000441728 SCAMP5Q8TAC9 235 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 FBXO44Q9H4M3 255 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 SMYD3Q9H7B4 428 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 CCSER2Q9H7U1 834 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 FOXD4L1Q9NU39 408 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 TMEM74BQ9NUR3 256 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 DNAJC17Q9NVM6 304 aaKnown RBP21.13■□□□□ 0.97
UBE2F-215ENST00000441728 GMIPQ9P107 970 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 PILRBQ9UKJ0 227 aa21.13■□□□□ 0.97
UBE2F-215ENST00000441728 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.12■□□□□ 0.97
UBE2F-215ENST00000441728 TGFB1I1O43294 461 aa21.12■□□□□ 0.97
UBE2F-215ENST00000441728 NDUFS2O75306 463 aa21.12■□□□□ 0.97
UBE2F-215ENST00000441728 HOXD13P35453 343 aa21.12■□□□□ 0.97
UBE2F-215ENST00000441728 CDH8P55286 799 aa21.12■□□□□ 0.97
UBE2F-215ENST00000441728 UNC13DQ70J99 1090 aa21.12■□□□□ 0.97
UBE2F-215ENST00000441728 EPM2AIP1Q7L775 607 aaPredicted RBP21.12■□□□□ 0.97
UBE2F-215ENST00000441728 RGL4Q8IZJ4 473 aa21.12■□□□□ 0.97
UBE2F-215ENST00000441728 SPRYD3Q8NCJ5 442 aa21.12■□□□□ 0.97
UBE2F-215ENST00000441728 LINC00301Q8NCQ3 95 aa21.12■□□□□ 0.97
UBE2F-215ENST00000441728 GOLGA5Q8TBA6 731 aa21.12■□□□□ 0.97
UBE2F-215ENST00000441728 ZCCHC14Q8WYQ9 949 aaKnown RBP21.12■□□□□ 0.97
UBE2F-215ENST00000441728 MAGEF1Q9HAY2 307 aa21.12■□□□□ 0.97
UBE2F-215ENST00000441728 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.12■□□□□ 0.973e-23■■■■■ 559
UBE2F-215ENST00000441728 TLR8Q9NR97 1041 aaKnown RBP21.12■□□□□ 0.97
UBE2F-215ENST00000441728 KRT82Q9NSB4 513 aa21.12■□□□□ 0.97
UBE2F-215ENST00000441728 TMEM30AQ9NV96 361 aa21.12■□□□□ 0.97
UBE2F-215ENST00000441728 CALCOCO1Q9P1Z2 691 aa21.12■□□□□ 0.97
UBE2F-215ENST00000441728 MTMR6Q9Y217 621 aa21.12■□□□□ 0.97
UBE2F-215ENST00000441728 NEDD8-MDP1E9PL57 170 aa21.11■□□□□ 0.97
UBE2F-215ENST00000441728 STX6O43752 255 aa21.11■□□□□ 0.97
UBE2F-215ENST00000441728 HYAL3O43820 417 aaPredicted RBP21.11■□□□□ 0.97
UBE2F-215ENST00000441728 TLR5O60602 858 aa21.11■□□□□ 0.97
UBE2F-215ENST00000441728 PPP6R2O75170 966 aa21.11■□□□□ 0.97
UBE2F-215ENST00000441728 TOP3BO95985 862 aaKnown RBP21.11■□□□□ 0.97
UBE2F-215ENST00000441728 SYPP08247 313 aa21.11■□□□□ 0.97
UBE2F-215ENST00000441728 ZNF33AQ06730 810 aa21.11■□□□□ 0.97
UBE2F-215ENST00000441728 TMEM25Q86YD3 366 aa21.11■□□□□ 0.97
UBE2F-215ENST00000441728 ETFBKMTQ8IXQ9 262 aa21.11■□□□□ 0.97
UBE2F-215ENST00000441728 C7orf25Q9BPX7 421 aa21.11■□□□□ 0.97
UBE2F-215ENST00000441728 BBS2Q9BXC9 721 aa21.11■□□□□ 0.97
UBE2F-215ENST00000441728 NEUROG3Q9Y4Z2 214 aa21.11■□□□□ 0.97
UBE2F-215ENST00000441728 MYOFQ9NZM1 2061 aa21.11■□□□□ 0.97
UBE2F-215ENST00000441728 SPAARA0A1B0GVQ0 90 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 H0Y626 953 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 CUTAO60888 179 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 TRIM16O95361 564 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 SERPINF2P08697 491 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 GABRG2P18507 467 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 NCOA4Q13772 614 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 E2F4Q16254 413 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 SNX30Q5VWJ9 437 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 ACOT1Q86TX2 421 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 ZNF516Q92618 1163 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 INTS4Q96HW7 963 aaKnown RBP21.1■□□□□ 0.97
UBE2F-215ENST00000441728 ZFRQ96KR1 1074 aaKnown RBP21.1■□□□□ 0.97
UBE2F-215ENST00000441728 DNAI2Q9GZS0 605 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 XYLT2Q9H1B5 865 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 SLC39A2Q9NP94 309 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 FAM13BQ9NYF5 915 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 WDR35Q9P2L0 1181 aa21.1■□□□□ 0.97
UBE2F-215ENST00000441728 TFIP11Q9UBB9 837 aaKnown RBP21.1■□□□□ 0.97
UBE2F-215ENST00000441728 ATP5C1P36542 298 aaKnown RBP21.09■□□□□ 0.97
UBE2F-215ENST00000441728 CASP4P49662 377 aa21.09■□□□□ 0.97
UBE2F-215ENST00000441728 KNOP1Q1ED39 458 aaKnown RBP21.09■□□□□ 0.97
UBE2F-215ENST00000441728 SYCP2LQ5T4T6 812 aa21.09■□□□□ 0.97
UBE2F-215ENST00000441728 TPGS1Q6ZTW0 290 aa21.09■□□□□ 0.97
UBE2F-215ENST00000441728 PHTF2Q8N3S3 785 aa21.09■□□□□ 0.97
UBE2F-215ENST00000441728 BLZF1Q9H2G9 400 aa21.09■□□□□ 0.97
UBE2F-215ENST00000441728 VRTNQ9H8Y1 702 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms