RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 CADM4Q8NFZ8 388 aa11.93□□□□□ -0.5
CSTF3-203ENST00000438862 IPO4Q8TEX9 1081 aaKnown RBP11.93□□□□□ -0.5
CSTF3-203ENST00000438862 GTF3C6Q969F1 213 aa11.93□□□□□ -0.5
CSTF3-203ENST00000438862 BICD1Q96G01 975 aa11.93□□□□□ -0.5
CSTF3-203ENST00000438862 CEP295NLQ96MC4 621 aa11.93□□□□□ -0.5
CSTF3-203ENST00000438862 SLC6A16Q9GZN6 736 aa11.93□□□□□ -0.5
CSTF3-203ENST00000438862 TRPM5Q9NZQ8 1165 aa11.93□□□□□ -0.5
CSTF3-203ENST00000438862 DEC1Q9P2X7 70 aa11.93□□□□□ -0.5
CSTF3-203ENST00000438862 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.93□□□□□ -0.5
CSTF3-203ENST00000438862 COL6A6A6NMZ7 2263 aa11.93□□□□□ -0.5
CSTF3-203ENST00000438862 FAM187AA6NFU0 413 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 MEI4A8MW99 385 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 B8ZZF3 427 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 BCAT2O15382 392 aaPredicted RBP11.92□□□□□ -0.5
CSTF3-203ENST00000438862 TLX3O43711 291 aaPredicted RBP11.92□□□□□ -0.5
CSTF3-203ENST00000438862 FAM189A1O60320 539 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 WISP1O95388 367 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 CDK4P11802 303 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 PDIA4P13667 645 aaKnown RBP11.92□□□□□ -0.5
CSTF3-203ENST00000438862 PLS3P13797 630 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 CD6P30203 668 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 CDC25AP30304 524 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 HNF1BP35680 557 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 PPP3CCP48454 512 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 SEMG2Q02383 582 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 PDIA5Q14554 519 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 SV2CQ496J9 727 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 CFAP221Q4G0U5 840 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 BTBD8Q5XKL5 378 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 METTL3Q86U44 580 aaKnown RBP11.92□□□□□ -0.5
CSTF3-203ENST00000438862 DDX42Q86XP3 938 aaKnown RBP eCLIP11.92□□□□□ -0.5
CSTF3-203ENST00000438862 DIS3L2Q8IYB7 885 aaKnown RBP11.92□□□□□ -0.5
CSTF3-203ENST00000438862 SNIP1Q8TAD8 396 aaKnown RBP11.92□□□□□ -0.5
CSTF3-203ENST00000438862 OTUB2Q96DC9 234 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 FUBP3Q96I24 572 aaKnown RBP eCLIP11.92□□□□□ -0.5
CSTF3-203ENST00000438862 ASB7Q9H672 318 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 CD248Q9HCU0 757 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 DPP3Q9NY33 737 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 EHD2Q9NZN4 543 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 LRWD1Q9UFC0 647 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.92□□□□□ -0.5
CSTF3-203ENST00000438862 FNDC3AQ9Y2H6 1198 aaKnown RBP11.92□□□□□ -0.5
CSTF3-203ENST00000438862 C2CD2Q9Y426 696 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 AK5Q9Y6K8 562 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 MYH11P35749 1972 aa11.92□□□□□ -0.5
CSTF3-203ENST00000438862 E9PMD0 336 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 JUPP14923 745 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 SCP2P22307 547 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 GUCY2CP25092 1073 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 GRK6P43250 576 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 LIG4P49917 911 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 MYL7Q01449 175 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 RHDQ02161 417 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 SRSF1Q07955 248 aaKnown RBP eCLIP11.91□□□□□ -0.58e-8■■■□□ 15.4
CSTF3-203ENST00000438862 LY6G5CQ5SRR4 150 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 C10orf76Q5T2E6 689 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 DHRS13Q6UX07 377 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 SPATA2LQ8IUW3 424 aaPredicted RBP11.91□□□□□ -0.5
CSTF3-203ENST00000438862 SCN4BQ8IWT1 228 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 ZCCHC9Q8N567 271 aaKnown RBP11.91□□□□□ -0.5
CSTF3-203ENST00000438862 FAM181AQ8N9Y4 354 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 KCNN1Q92952 543 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 MRGPRX1Q96LB2 322 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 RUSC1Q9BVN2 902 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 NRSN2Q9GZP1 204 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 RNF38Q9H0F5 515 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 WSB2Q9NYS7 404 aaPredicted RBP11.91□□□□□ -0.5
CSTF3-203ENST00000438862 CPSF3Q9UKF6 684 aaKnown RBP11.91□□□□□ -0.5
CSTF3-203ENST00000438862 GTF3C4Q9UKN8 822 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 PCDHB6Q9Y5E3 794 aa11.91□□□□□ -0.5
CSTF3-203ENST00000438862 E2F8A0AVK6 867 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 TULP3O75386 442 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 OLFM2O95897 454 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 NTRK1P04629 796 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 NCAM1P13591 858 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 PNPLA4P41247 253 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 WASP42768 502 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 MAGEA11P43364 429 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 HMGN5P82970 282 aaKnown RBP11.9□□□□□ -0.5
CSTF3-203ENST00000438862 BNC1Q01954 994 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 RTP5Q14D33 572 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 INTS6LQ5JSJ4 861 aaKnown RBP11.9□□□□□ -0.5
CSTF3-203ENST00000438862 ETFBKMTQ8IXQ9 262 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 CHPFQ8IZ52 775 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 TMEM86AQ8N2M4 240 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 NAT16Q8N8M0 369 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 TERB1Q8NA31 727 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 FGF11Q92914 225 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 SPATA17Q96L03 361 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 GABRG3Q99928 467 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 MSTO1Q9BUK6 570 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 MIR1-1HGQ9H1L0 117 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 DDX43Q9NXZ2 648 aaKnown RBP11.9□□□□□ -0.5
CSTF3-203ENST00000438862 CFAP97Q9P2B7 532 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 DNMT3LQ9UJW3 386 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 HCN2Q9UL51 889 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 BTBD3Q9Y2F9 522 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 KIF3AQ9Y496 699 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 CPQQ9Y646 472 aa11.9□□□□□ -0.5
CSTF3-203ENST00000438862 CABIN1Q9Y6J0 2220 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms