RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 LACTBL1A8MY62 500 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 LOC730098B7Z3J9 87 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 TGM5O43548 720 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 TRAPPC3O43617 180 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 LRRN2O75325 713 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 C1RP00736 705 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 ADRB2P07550 413 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 WEE2P0C1S8 567 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 PFKFB1P16118 471 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 TKTP29401 623 aaKnown RBP7.49□□□□□ -1.21
HMGN1-205ENST00000419378 ADSSP30520 456 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 RPL9P32969 192 aaKnown RBP7.49□□□□□ -1.21
HMGN1-205ENST00000419378 ACOT2P49753 483 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 RNF4P78317 190 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 AMPD3Q01432 767 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 IFRD2Q12894 506 aaPredicted RBP7.49□□□□□ -1.21
HMGN1-205ENST00000419378 ALCAMQ13740 583 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 ZBTB6Q15916 424 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 RNF43Q68DV7 783 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 SLFN12LQ6IEE8 588 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 PDXDC1Q6P996 788 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 TMC5Q6UXY8 1006 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 FAM214BQ7L5A3 538 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 CEP57Q86XR8 500 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 PALB2Q86YC2 1186 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 LNX1Q8TBB1 728 aaPredicted RBP7.49□□□□□ -1.21
HMGN1-205ENST00000419378 RNF141Q8WVD5 230 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 POMGNT1Q8WZA1 660 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 NECTIN4Q96NY8 510 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 DNAJC7Q99615 494 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 C7orf25Q9BPX7 421 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 PYM1Q9BRP8 204 aaKnown RBP7.49□□□□□ -1.21
HMGN1-205ENST00000419378 POMKQ9H5K3 350 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 RPF1Q9H9Y2 349 aaKnown RBP7.49□□□□□ -1.21
HMGN1-205ENST00000419378 MAN1C1Q9NR34 630 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 DPP7Q9UHL4 492 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 AGO2Q9UKV8 859 aaKnown RBP7.49□□□□□ -1.21
HMGN1-205ENST00000419378 UBQLN1Q9UMX0 589 aaKnown RBP7.49□□□□□ -1.21
HMGN1-205ENST00000419378 NUB1Q9Y5A7 615 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 ATP6V1DQ9Y5K8 247 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 ANK1P16157 1881 aa7.49□□□□□ -1.21
HMGN1-205ENST00000419378 C2orf16Q68DN1 1984 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 A0A1B0GVL5 298 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 ADAM12O43184 909 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 XPOTO43592 962 aaKnown RBP7.48□□□□□ -1.21
HMGN1-205ENST00000419378 SUSD5O60279 629 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 RFPL2O75678 378 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 PRPF6O94906 941 aaKnown RBP7.48□□□□□ -1.21
HMGN1-205ENST00000419378 SPATA31D3P0C874 917 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 CYP3A5P20815 502 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 SP100P23497 879 aaPredicted RBP7.48□□□□□ -1.21
HMGN1-205ENST00000419378 CMA1P23946 247 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 CASP1P29466 404 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 LRPAP1P30533 357 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 MTHFRP42898 656 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 GUCY2FP51841 1108 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 CUL4BQ13620 913 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 FAM26FQ5R3K3 315 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 ATAT1Q5SQI0 421 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 JADE1Q6IE81 842 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 CRELD2Q6UXH1 353 aaPredicted RBP7.48□□□□□ -1.21
HMGN1-205ENST00000419378 RSPO2Q6UXX9 243 aaPredicted RBP7.48□□□□□ -1.21
HMGN1-205ENST00000419378 C15orf39Q6ZRI6 1047 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 SPATA31D4Q6ZUB0 917 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 STXBP4Q6ZWJ1 553 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 UNC13DQ70J99 1090 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 ZNF765Q7L2R6 523 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 EPM2AIP1Q7L775 607 aaPredicted RBP7.48□□□□□ -1.21
HMGN1-205ENST00000419378 GPR149Q86SP6 731 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 CD302Q8IX05 232 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 GRAMD1CQ8IYS0 662 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 CEP57L1Q8IYX8 460 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 SYCP3Q8IZU3 236 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 KREMEN2Q8NCW0 462 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 CMASQ8NFW8 434 aaPredicted RBP7.48□□□□□ -1.21
HMGN1-205ENST00000419378 SAAL1Q96ER3 474 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 RPGRIP1Q96KN7 1286 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 HEXIM2Q96MH2 286 aaKnown RBP7.48□□□□□ -1.21
HMGN1-205ENST00000419378 RIPOR3Q96MK2 946 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 TSPAN18Q96SJ8 248 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 CLSTN3Q9BQT9 956 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 ASPNQ9BXN1 380 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 SCAND2PQ9GZW5 306 aaPredicted RBP7.48□□□□□ -1.21
HMGN1-205ENST00000419378 BLZF1Q9H2G9 400 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 EPHX3Q9H6B9 360 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 TMEM206Q9H813 350 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 MTRRQ9UBK8 725 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 FBXW11Q9UKB1 542 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 HPSEQ9Y251 543 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 DERAQ9Y315 318 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 BACE2Q9Y5Z0 518 aa7.48□□□□□ -1.21
HMGN1-205ENST00000419378 TCHHQ07283 1943 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 MTCL1Q9Y4B5 1905 aaKnown RBP7.47□□□□□ -1.21
HMGN1-205ENST00000419378 FAM237AA0A1B0GTK4 181 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 C2CD4DB7Z1M9 353 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 PPEF2O14830 753 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 SYN3O14994 580 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 EIF3DO15371 548 aaKnown RBP eCLIP7.47□□□□□ -1.21
HMGN1-205ENST00000419378 CBFA2T2O43439 604 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 DCXO43602 365 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms