RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 TTC25Q96NG3 672 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 CGRRF1Q99675 332 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 ELP3Q9H9T3 547 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 TAS2R1Q9NYW7 299 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 CCDC22O60826 627 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 TBX10O75333 385 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 CYP1A1P04798 512 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 C6orf222P0C671 652 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 ZNF286BP0CG31 522 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 ACAT1P24752 427 aaKnown RBP13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 PTPN4P29074 926 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 NDST1P52848 882 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 USP4Q13107 963 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 CUL3Q13618 768 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 MORF4L2Q15014 288 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 KIZQ2M2Z5 673 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 TREML2Q5T2D2 321 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 LPCAT4Q643R3 524 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 TLDC1Q6P9B6 456 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 AGGF1Q8N302 714 aaeCLIP13.72□□□□□ -0.218e-7■■■■■ 36.5
TNFRSF8-203ENST00000417814 SCYL1Q96KG9 808 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 PLA2G4CQ9UP65 541 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 WDR27A2RRH5 827 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 A6NJR5 290 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 LACTBL1A8MY62 500 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 MICAL2O94851 1124 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 TGFB2P61812 414 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 JADE1Q6IE81 842 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 CRLF3Q8IUI8 442 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 CCHCR1Q8TD31 782 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 USP13Q92995 863 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 VTI1AQ96AJ9 217 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 MTBPQ96DY7 904 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 STOML1Q9UBI4 398 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 DNAJC16Q9Y2G8 782 aa13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 TIMM13Q9Y5L4 95 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF8-203ENST00000417814 COL14A1Q05707 1796 aaKnown RBP13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 ALOX15BO15296 676 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 PEX1O43933 1283 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 DKC1O60832 514 aaKnown RBP eCLIP13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 KRT37O76014 449 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 ERVK-10P10266 1014 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 AKAP5P24588 427 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 INHBEP58166 350 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 PIGHQ14442 188 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 PAN2Q504Q3 1202 aaKnown RBP13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 C10orf82Q8WW14 230 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 C17orf75Q9HAS0 396 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 PHLPP1O60346 1717 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 KRT7P08729 469 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 SERPINB5P36952 375 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 SLC30A9Q6PML9 568 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 LAYNQ6UX15 382 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 SAMD3Q8N6K7 520 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 HPDLQ96IR7 371 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 CXCL16Q9H2A7 254 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 CAB39LQ9H9S4 337 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 AVENQ9NQS1 362 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 ARHGAP28Q9P2N2 729 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 SCOCQ9UIL1 159 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 COQ4Q9Y3A0 265 aa13.71□□□□□ -0.21
TNFRSF8-203ENST00000417814 OSBPP22059 807 aa13.71□□□□□ -0.22
TNFRSF8-203ENST00000417814 GNL1P36915 607 aaPredicted RBP13.71□□□□□ -0.22
TNFRSF8-203ENST00000417814 GRM1Q13255 1194 aa13.71□□□□□ -0.22
TNFRSF8-203ENST00000417814 TNFAIP1Q13829 316 aa13.71□□□□□ -0.22
TNFRSF8-203ENST00000417814 KLHL38Q2WGJ6 581 aa13.71□□□□□ -0.22
TNFRSF8-203ENST00000417814 ANO7Q6IWH7 933 aa13.71□□□□□ -0.22
TNFRSF8-203ENST00000417814 MCUQ8NE86 351 aa13.71□□□□□ -0.22
TNFRSF8-203ENST00000417814 RNF34Q969K3 372 aa13.71□□□□□ -0.22
TNFRSF8-203ENST00000417814 OXNAD1Q96HP4 312 aaPredicted RBP13.71□□□□□ -0.22
TNFRSF8-203ENST00000417814 ATXN3LQ9H3M9 355 aa13.71□□□□□ -0.22
TNFRSF8-203ENST00000417814 TSR3Q9UJK0 312 aaKnown RBP13.71□□□□□ -0.22
TNFRSF8-203ENST00000417814 TSPAN16Q9UKR8 245 aa13.71□□□□□ -0.22
TNFRSF8-203ENST00000417814 MYOCOSA0A1B0GUC4 107 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 SPECC1L-ADORA2AF8WAN1 911 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 GSC2O15499 205 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 TXNP10599 105 aaKnown RBP13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 TYK2P29597 1187 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 SDC4P31431 198 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 C1QBPQ07021 282 aaKnown RBP13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 GOLGA7BQ2TAP0 167 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 GALNTL6Q49A17 601 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 TMCO4Q5TGY1 634 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 RNF43Q68DV7 783 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 B3GNT9Q6UX72 402 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 ABHD15Q6UXT9 468 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 TREML1Q86YW5 311 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 TP53INP2Q8IXH6 220 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 ARFGAP1Q8N6T3 406 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 CCNYL1Q8N7R7 359 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 RBM15BQ8NDT2 890 aaKnown RBP13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 EXT2Q93063 718 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 GRAMD1AQ96CP6 724 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 PORCNQ9H237 461 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 GOLGA2P5Q9HBQ8 144 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 PCDH9Q9HC56 1237 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 PTPRHQ9HD43 1115 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 PNPOQ9NVS9 261 aa13.7□□□□□ -0.22
TNFRSF8-203ENST00000417814 LDHAP00338 332 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms