RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 PHTF2Q8N3S3 785 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 FAM160A2Q8N612 972 aaPredicted RBP15.97■□□□□ 0.15
UBXN4-203ENST00000416538 USP33Q8TEY7 942 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 TATDN2Q93075 761 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 CYFIP2Q96F07 1278 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 PHF12Q96QT6 1004 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 NT5C1AQ9BXI3 368 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 IMPG2Q9BZV3 1241 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 CYP3A43Q9HB55 503 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 DLL3Q9NYJ7 618 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 GMEB2Q9UKD1 530 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 MDM4O15151 490 aa15.96■□□□□ 0.15
UBXN4-203ENST00000416538 TLR5O60602 858 aa15.96■□□□□ 0.15
UBXN4-203ENST00000416538 IRF1P10914 325 aa15.96■□□□□ 0.15
UBXN4-203ENST00000416538 BMP6P22004 513 aa15.96■□□□□ 0.15
UBXN4-203ENST00000416538 GTF2H1P32780 548 aa15.96■□□□□ 0.15
UBXN4-203ENST00000416538 SEC13P55735 322 aa15.96■□□□□ 0.15
UBXN4-203ENST00000416538 NUCB2P80303 420 aa15.96■□□□□ 0.15
UBXN4-203ENST00000416538 AMPD2Q01433 879 aa15.96■□□□□ 0.15
UBXN4-203ENST00000416538 RSPO4Q2I0M5 234 aaPredicted RBP15.96■□□□□ 0.15
UBXN4-203ENST00000416538 FBXO43Q4G163 708 aa15.96■□□□□ 0.15
UBXN4-203ENST00000416538 SYT13Q7L8C5 426 aa15.96■□□□□ 0.15
UBXN4-203ENST00000416538 KIAA1958Q8N8K9 716 aa15.96■□□□□ 0.15
UBXN4-203ENST00000416538 P2RY11Q96G91 374 aa15.96■□□□□ 0.15
UBXN4-203ENST00000416538 GSDMAQ96QA5 445 aa15.96■□□□□ 0.15
UBXN4-203ENST00000416538 ZDHHC4Q9NPG8 344 aa15.96■□□□□ 0.15
UBXN4-203ENST00000416538 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.96■□□□□ 0.15
UBXN4-203ENST00000416538 E2F8A0AVK6 867 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 GADD45BO75293 160 aaPredicted RBP15.95■□□□□ 0.14
UBXN4-203ENST00000416538 EPB41P11171 864 aaKnown RBP15.95■□□□□ 0.14
UBXN4-203ENST00000416538 RAD23BP54727 409 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 KDSRQ06136 332 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 DMC1Q14565 340 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 DCAF17Q5H9S7 520 aaPredicted RBP15.95■□□□□ 0.14
UBXN4-203ENST00000416538 LY6G5CQ5SRR4 150 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 ISM2Q6H9L7 571 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.95■□□□□ 0.14
UBXN4-203ENST00000416538 SCD5Q86SK9 330 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 KBTBD6Q86V97 674 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 ETFBKMTQ8IXQ9 262 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 SLC4A11Q8NBS3 891 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 FBXL13Q8NEE6 735 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 GAB3Q8WWW8 586 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 SLC35C1Q96A29 364 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 CYLDQ9NQC7 956 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 CISHQ9NSE2 258 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 RMND1Q9NWS8 449 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 COMMD8Q9NX08 183 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 RAB20Q9NX57 234 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 NUDT5Q9UKK9 219 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 MAN1B1Q9UKM7 699 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 USP18Q9UMW8 372 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 SLC8A2Q9UPR5 921 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 SCML2Q9UQR0 700 aa15.95■□□□□ 0.14
UBXN4-203ENST00000416538 CNOT1A5YKK6 2376 aaKnown RBP15.94■□□□□ 0.14
UBXN4-203ENST00000416538 A0A1W2PQH9 124 aa15.94■□□□□ 0.14
UBXN4-203ENST00000416538 MED19A0JLT2 244 aaPredicted RBP15.94■□□□□ 0.14
UBXN4-203ENST00000416538 TRIM24O15164 1050 aa15.94■□□□□ 0.14
UBXN4-203ENST00000416538 CETN3O15182 167 aa15.94■□□□□ 0.14
UBXN4-203ENST00000416538 SLC16A3O15427 465 aaKnown RBP15.94■□□□□ 0.14
UBXN4-203ENST00000416538 RETP07949 1114 aa15.94■□□□□ 0.14
UBXN4-203ENST00000416538 ADH5P11766 374 aa15.94■□□□□ 0.14
UBXN4-203ENST00000416538 ACO1P21399 889 aaKnown RBP15.94■□□□□ 0.14
UBXN4-203ENST00000416538 CNR2P34972 360 aa15.94■□□□□ 0.14
UBXN4-203ENST00000416538 KIF11P52732 1056 aa15.94■□□□□ 0.14
UBXN4-203ENST00000416538 NR1H3Q13133 447 aa15.94■□□□□ 0.14
UBXN4-203ENST00000416538 C2orf27AQ580R0 203 aa15.94■□□□□ 0.14
UBXN4-203ENST00000416538 DDX42Q86XP3 938 aaKnown RBP eCLIP15.94■□□□□ 0.14
UBXN4-203ENST00000416538 UBR7Q8N806 425 aa15.94■□□□□ 0.14
UBXN4-203ENST00000416538 SMARCE1Q969G3 411 aa15.94■□□□□ 0.14
UBXN4-203ENST00000416538 TIGD1Q96MW7 591 aa15.94■□□□□ 0.14
UBXN4-203ENST00000416538 KLF16Q9BXK1 252 aaPredicted RBP15.94■□□□□ 0.14
UBXN4-203ENST00000416538 RAB23Q9ULC3 237 aa15.94■□□□□ 0.14
UBXN4-203ENST00000416538 COQ4Q9Y3A0 265 aa15.94■□□□□ 0.14
UBXN4-203ENST00000416538 GON4LQ3T8J9 2241 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 CCDC163A0A0D9SF12 145 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 SLC9A3R1O14745 358 aaPredicted RBP15.93■□□□□ 0.14
UBXN4-203ENST00000416538 DCLK1O15075 740 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 ATG13O75143 517 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 RPP40O75818 363 aaKnown RBP15.93■□□□□ 0.14
UBXN4-203ENST00000416538 CCDC6Q16204 474 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 EMC10Q5UCC4 262 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 TCERG1LQ5VWI1 586 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 TMEM92Q6UXU6 159 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 CEP68Q76N32 757 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 ERMP1Q7Z2K6 904 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 TTC30AQ86WT1 665 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 CCDC33Q8N5R6 958 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 ACDQ96AP0 544 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 DUSP9Q99956 384 aaKnown RBP15.93■□□□□ 0.14
UBXN4-203ENST00000416538 DUSP16Q9BY84 665 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 FBXO44Q9H4M3 255 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 PNPLA8Q9NP80 782 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 TLR8Q9NR97 1041 aaKnown RBP15.93■□□□□ 0.14
UBXN4-203ENST00000416538 SEMA4GQ9NTN9 838 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.93■□□□□ 0.14
UBXN4-203ENST00000416538 HCN2Q9UL51 889 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 USP3Q9Y6I4 520 aa15.93■□□□□ 0.14
UBXN4-203ENST00000416538 PI4KAP42356 2102 aa15.92■□□□□ 0.14
UBXN4-203ENST00000416538 GOLGA6L4A6NEF3 574 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms