RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 MED15Q96RN5 788 aa10.73□□□□□ -0.69
NCKIPSD-202ENST00000413374 TSPAN16Q9UKR8 245 aa10.73□□□□□ -0.69
NCKIPSD-202ENST00000413374 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.73□□□□□ -0.69
NCKIPSD-202ENST00000413374 MYO15AQ9UKN7 3530 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 E2F8A0AVK6 867 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 K7ESF4 209 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 PIK3R2O00459 728 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 SLC9A3R1O14745 358 aaPredicted RBP10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 GNA14O95837 355 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 AFPP02771 609 aaKnown RBP10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 HMBSP08397 361 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 CCDC192P0DO97 292 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 TDGF1P13385 188 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 DRD1P21728 446 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 OPRD1P41143 372 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 YWHAEP62258 255 aaKnown RBP10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 PDE4CQ08493 712 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 CETN1Q12798 172 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 TPD52L1Q16890 204 aaPredicted RBP10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 GAB4Q2WGN9 574 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 ANO4Q32M45 955 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 SGO2Q562F6 1265 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 C2orf27AQ580R0 203 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 HSP90AA4PQ58FG1 418 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 C10orf120Q5SQS8 335 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 LY6G5CQ5SRR4 150 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 C12orf40Q86WS4 652 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 DDX42Q86XP3 938 aaKnown RBP eCLIP10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 TMEM25Q86YD3 366 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 MIB1Q86YT6 1006 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 SFTPA1Q8IWL2 248 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 SYNPOQ8N3V7 929 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 TTC39CQ8N584 583 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 ANKRD52Q8NB46 1076 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 ZBTB44Q8NCP5 570 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 RPLP0P6Q8NHW5 317 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 LMO3Q8TAP4 145 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 TFAP2BQ92481 460 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 FAXDC2Q96IV6 333 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 CRACR2AQ9BSW2 395 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 KLF16Q9BXK1 252 aaPredicted RBP10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 INTS2Q9H0H0 1204 aaKnown RBP10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 CLSTN2Q9H4D0 955 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 ZDHHC4Q9NPG8 344 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 HESX1Q9UBX0 185 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 RWDD2AQ9UIY3 292 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 SLC8A2Q9UPR5 921 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 PCDHGA2Q9Y5H1 932 aa10.72□□□□□ -0.69
NCKIPSD-202ENST00000413374 HRO43593 1189 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 FGFR1OPO95684 399 aaKnown RBP10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 RALAP11233 206 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 VDRP11473 427 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 ADH5P11766 374 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 LCP1P13796 627 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 TBXAS1P24557 533 aaPredicted RBP10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 BRD2P25440 801 aaKnown RBP10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 RGS7P49802 495 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 TUBP50607 506 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 TKTL1P51854 596 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 NRLP54845 237 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 SLC8A3P57103 927 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 APBA1Q02410 837 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 KDSRQ06136 332 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 MESP2Q0VG99 397 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 EFEMP1Q12805 493 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 EMC10Q5UCC4 262 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 GJB7Q6PEY0 223 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 MAMSTRQ6ZN01 415 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 PRR23BQ6ZRT6 265 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 TPGS1Q6ZTW0 290 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 CCDC33Q8N5R6 958 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 UBR7Q8N806 425 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 SUMF1Q8NBK3 374 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 NELL1Q92832 810 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 EXOC4Q96A65 974 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 CNOT6LQ96LI5 555 aaKnown RBP10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 IER2Q9BTL4 223 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 ULBP1Q9BZM6 244 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 SEMA4AQ9H3S1 761 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 LRRC4Q9HBW1 653 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 UBE2TQ9NPD8 197 aaPredicted RBP10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 LMBRD1Q9NUN5 540 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 TBC1D14Q9P2M4 693 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 RASAL2Q9UJF2 1139 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 USP3Q9Y6I4 520 aa10.71□□□□□ -0.69
NCKIPSD-202ENST00000413374 TICRRQ7Z2Z1 1910 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 K7EQS6 105 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 TRIM24O15164 1050 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 P4HA2O15460 535 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 LILRB5O75023 590 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 ATG13O75143 517 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 ZBED1O96006 694 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 ADH1CP00326 375 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 KRT5P13647 590 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 SLC9A1P19634 815 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 TIE1P35590 1138 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 MTIF2P46199 727 aaKnown RBP10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 PLA2G4AP47712 749 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 YWHAGP61981 247 aaKnown RBP eCLIP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms