RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 ESRRAP11474 423 aaPredicted RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 MMP8P22894 467 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 ABL2P42684 1182 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 ARFIP2P53365 341 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 EPHB1P54762 984 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 ZC3H12AQ5D1E8 599 aaKnown RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 IL31Q6EBC2 164 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 POLNQ7Z5Q5 900 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 BRSK2Q8IWQ3 736 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 RCOR2Q8IZ40 523 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 TRIM11Q96F44 468 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 NAF1Q96HR8 494 aaKnown RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 SPATA33Q96N06 139 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 RAB3IPQ96QF0 476 aaPredicted RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 TMEM120AQ9BXJ8 343 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 UNKQ9C0B0 810 aaKnown RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 DLGAP2Q9P1A6 1054 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 ARHGAP42A6NI28 874 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 E5RJQ4 531 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 CAPN9O14815 690 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 MCF2LO15068 1137 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 MIPP30301 263 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 GRIA1P42261 906 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 THOC5Q13769 683 aaKnown RBP9.68□□□□□ -0.86
NDE1-201ENST00000396354 GALNTL6Q49A17 601 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 GLRA4Q5JXX5 417 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 RNASEH2BQ5TBB1 312 aaKnown RBP9.68□□□□□ -0.86
NDE1-201ENST00000396354 CDHR3Q6ZTQ4 885 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 RSPH3Q86UC2 560 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 SPNS2Q8IVW8 549 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 STMN2Q93045 179 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 FAM81BQ96LP2 452 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 XYLT2Q9H1B5 865 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 PTPRHQ9HD43 1115 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 WASF2Q9Y6W5 498 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 BPTFQ12830 3046 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 LOC100653049A0A140TA62 436 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.68□□□□□ -0.86
NDE1-201ENST00000396354 ADCY6O43306 1168 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 ZMPSTE24O75844 475 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 KRT34O76011 436 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 RNF8O76064 485 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 ASS1P00966 412 aaKnown RBP9.68□□□□□ -0.86
NDE1-201ENST00000396354 PRKCBP05771 671 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 ZNF286BP0CG31 522 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 T-ENOLP0DO92 83 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 PROZP22891 400 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 CDKN2BP42772 138 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 IREB2P48200 963 aaKnown RBP9.68□□□□□ -0.86
NDE1-201ENST00000396354 RASSF2P50749 326 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 SPDYCQ5MJ68 293 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 PLEKHA7Q6IQ23 1121 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 ATP11CQ8NB49 1132 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 BBOF1Q8ND07 529 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 WDR60Q8WVS4 1066 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 PHF12Q96QT6 1004 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 MIPEPQ99797 713 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 ADPGKQ9BRR6 497 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 TMEM109Q9BVC6 243 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 B3GNT5Q9BYG0 378 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 SDCBP2Q9H190 292 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 TMEM134Q9H6X4 195 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 CPSF3Q9UKF6 684 aaKnown RBP9.68□□□□□ -0.86
NDE1-201ENST00000396354 CNTN6Q9UQ52 1028 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 TRIP11Q15643 1979 aa9.68□□□□□ -0.86
NDE1-201ENST00000396354 CXorf49A8MYA2 514 aaPredicted RBP9.67□□□□□ -0.86
NDE1-201ENST00000396354 ZC3H11AO75152 810 aaKnown RBP eCLIP9.67□□□□□ -0.86
NDE1-201ENST00000396354 NFICP08651 508 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 RFC5P40937 340 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 ASPAP45381 313 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 RABGGTBP53611 331 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 CAV1Q03135 178 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 OLIG2Q13516 323 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 CLNKQ7Z7G1 428 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 SCUBE3Q8IX30 993 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 ANKRD13AQ8IZ07 590 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 WDR83Q9BRX9 315 aaKnown RBP9.67□□□□□ -0.86
NDE1-201ENST00000396354 TRIM55Q9BYV6 548 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 NMUR2Q9GZQ4 415 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 AVENQ9NQS1 362 aaPredicted RBP9.67□□□□□ -0.86
NDE1-201ENST00000396354 PRKAG3Q9UGI9 489 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 SIX4Q9UIU6 781 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 TTLL3Q9Y4R7 772 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 PLXNB2O15031 1838 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 TCRBV9S1A1TA0A576 114 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 GPR25O00155 361 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 COPEO14579 308 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 ERBB2P04626 1255 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 PDGFRAP16234 1089 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 POLE2P56282 527 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 SESN2P58004 480 aaPredicted RBP9.67□□□□□ -0.86
NDE1-201ENST00000396354 MBTD1Q05BQ5 628 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 ARHGAP1Q07960 439 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 PDK4Q16654 411 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 DUOXA2Q1HG44 320 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 TNFAIP8L3Q5GJ75 292 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 TLDC1Q6P9B6 456 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 TMEM154Q6P9G4 183 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 ENOSF1Q7L5Y1 443 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 TTC16Q8NEE8 873 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms