RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MAPK13O15264 365 aa18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 KRT37O76014 449 aa18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 KLF8O95600 359 aaPredicted RBP18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 HNRNPLP14866 589 aaKnown RBP eCLIP18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 MESP2Q0VG99 397 aa18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 IFRD2Q12894 506 aaPredicted RBP18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 STK4Q13043 487 aa18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 BTBD8Q5XKL5 378 aa18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 CYP2U1Q7Z449 544 aa18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 KIAA0895Q8NCT3 520 aa18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 CHAMP1Q96JM3 812 aa18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 MED10Q9BTT4 135 aa18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 SDCBP2Q9H190 292 aa18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 SPHK2Q9NRA0 654 aa18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 DEC1Q9P2X7 70 aa18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 PLXND1Q9Y4D7 1925 aa18.52■□□□□ 0.56
SNRPA1-202ENST00000394082 ZFHX4Q86UP3 3567 aa18.52■□□□□ 0.55
SNRPA1-202ENST00000394082 THADAQ6YHU6 1953 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 USP24Q9UPU5 2620 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 ANTXRLA6NF34 631 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 C4orf47A7E2U8 309 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 ACTN4O43707 911 aaKnown RBP18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 ADAM23O75077 832 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 AP1G2O75843 785 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 ASS1P00966 412 aaKnown RBP18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 TRIM21P19474 475 aaKnown RBP18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 CSRP1P21291 193 aaKnown RBP18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 BCKDHBP21953 392 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 HOXD12P35452 270 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 TIE1P35590 1138 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 ENPEPQ07075 957 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 HTR3DQ70Z44 454 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 LPCAT2Q7L5N7 544 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 SFTPA1Q8IWL2 248 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 ZMIZ2Q8NF64 920 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 PAGE5Q96GU1 130 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 SMOQ99835 787 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 CCSER2Q9H7U1 834 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 PNPLA8Q9NP80 782 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 TMEM9BQ9NQ34 198 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 CYLDQ9NQC7 956 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 TLR8Q9NR97 1041 aaKnown RBP18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 KRT82Q9NSB4 513 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 EXOC1Q9NV70 894 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 INVSQ9Y283 1065 aa18.51■□□□□ 0.55
SNRPA1-202ENST00000394082 MYOFQ9NZM1 2061 aa18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 CDX4O14627 284 aaPredicted RBP18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 TLR5O60602 858 aa18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 TULP3O75386 442 aa18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 CEACAM1P13688 526 aa18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 LMAN2Q12907 356 aa18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 MAP7D1Q3KQU3 841 aa18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 KLHDC10Q6PID8 442 aa18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 SV2AQ7L0J3 742 aa18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 ACOT1Q86TX2 421 aa18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 BBS7Q8IWZ6 715 aa18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 TERB1Q8NA31 727 aa18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 GMIPQ9P107 970 aa18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 SERTAD1Q9UHV2 236 aa18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 TRAF3IP3Q9Y228 551 aa18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 CFAP47Q6ZTR5 3102 aa18.5■□□□□ 0.55
SNRPA1-202ENST00000394082 TBC1D3BA6NDS4 549 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 SCAMP3O14828 347 aaKnown RBP18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 GREM1O60565 184 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 KIF20AO95235 890 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 NR3C1P04150 777 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 KCNA4P22459 653 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 NDST1P52848 882 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 DLG4P78352 724 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 INCA1Q0VD86 236 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 NFIL3Q16649 462 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 KMT5BQ4FZB7 885 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 EMC10Q5UCC4 262 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 PEAR1Q5VY43 1037 aaPredicted RBP18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 PSAPL1Q6NUJ1 521 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 SYT12Q8IV01 421 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 ZNF276Q8N554 614 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 SLC2A14Q8TDB8 520 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 HNRNPABQ99729 332 aaKnown RBP18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 MARK1Q9P0L2 795 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 SCML2Q9UQR0 700 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 FRMD4BQ9Y2L6 1034 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 FRYQ5TBA9 3013 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 CEP295Q9C0D2 2601 aa18.49■□□□□ 0.55
SNRPA1-202ENST00000394082 CACNG3O60359 315 aa18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 BEST1O76090 585 aa18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 CMA1P23946 247 aa18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 ASPAP45381 313 aa18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 DHPSP49366 369 aaPredicted RBP18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 NOVA1P51513 510 aaKnown RBP18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 MCCD1P59942 119 aaPredicted RBP18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 IRX4P78413 519 aa18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 GOLGA8FQ08AF8 430 aa18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 GOLGA8DPQ0D2H9 430 aa18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 SCARA5Q6ZMJ2 495 aa18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 TMEM25Q86YD3 366 aa18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 GRAMD1CQ8IYS0 662 aa18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 ZNF513Q8N8E2 541 aaPredicted RBP18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 FAXDC2Q96IV6 333 aa18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 KLF16Q9BXK1 252 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms