RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 DENND1BQ6P3S1 775 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 RNF180Q86T96 592 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 ARRDC4Q8NCT1 418 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 GPRASP2Q96D09 838 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 GCOM2Q9BZD3 368 aaPredicted RBP11.81□□□□□ -0.52
SMAD9-202ENST00000379826 DNAJC6O75061 913 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 GPC4O75487 556 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 SMNDC1O75940 238 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMAD9-202ENST00000379826 DSG3P32926 999 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 ATF7IP2Q5U623 682 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 CLNKQ7Z7G1 428 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 CCDC60Q8IWA6 550 aaPredicted RBP11.81□□□□□ -0.52
SMAD9-202ENST00000379826 UNC45BQ8IWX7 931 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 MFSD14AQ96MC6 490 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 SPATA33Q96N06 139 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 CCDC134Q9H6E4 229 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 COL14A1Q05707 1796 aaKnown RBP11.81□□□□□ -0.52
SMAD9-202ENST00000379826 E9PBE3 544 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 KLHL41O60662 606 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 SKIV2L2P42285 1042 aaKnown RBP11.8□□□□□ -0.52
SMAD9-202ENST00000379826 SLC25A3Q00325 362 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 KDELC2Q7Z4H8 507 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 UCMAQ8WVF2 138 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 LPAR1Q92633 364 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 ATP8B3O60423 1300 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 EME2A4GXA9 379 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-202ENST00000379826 PRPF4O43172 522 aaKnown RBP eCLIP11.8□□□□□ -0.521e-6■■■□□ 16.8
SMAD9-202ENST00000379826 KDELR1P24390 212 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 RFC1P35251 1148 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-202ENST00000379826 CASP2P42575 452 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 GDF10P55107 478 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 IRGCQ6NXR0 463 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMAD9-202ENST00000379826 ZDHHC14Q8IZN3 488 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 LRRC43Q8N309 656 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 KIF12Q96FN5 646 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 ZMPSTE24O75844 475 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 MTA2O94776 668 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 ASMTLO95671 621 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 SUPT20HL2P0C7V6 817 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 ZNF184Q99676 751 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-202ENST00000379826 PACSIN3Q9UKS6 424 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 ZMYND8Q9ULU4 1186 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-202ENST00000379826 GSTA2P09210 222 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 HOXA10P31260 410 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-202ENST00000379826 TCF7P36402 384 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-202ENST00000379826 AVPR1AP37288 418 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 ACAD11Q709F0 780 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMAD9-202ENST00000379826 TMPRSS6Q8IU80 811 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 GDPD5Q8WTR4 605 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 DOCK2Q92608 1830 aa11.8□□□□□ -0.52
SMAD9-202ENST00000379826 WDR27A2RRH5 827 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 SPAG6O75602 509 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 NAMPTP43490 491 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 NUDT2P50583 147 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 LAMB3Q13751 1172 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 BLMHQ13867 455 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 PRPSAP1Q14558 356 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 RNF135Q8IUD6 432 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 NLGN2Q8NFZ4 835 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 MFSD1Q9H3U5 465 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 XAB2Q9HCS7 855 aaKnown RBP11.79□□□□□ -0.52
SMAD9-202ENST00000379826 UBIAD1Q9Y5Z9 338 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 C2CD2LO14523 706 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 RGL2O15211 777 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 ALOX15BO15296 676 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 CCNE2O96020 404 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 PDGFRBP09619 1106 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 MIPP30301 263 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 SULT1E1P49888 294 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 EFNA5P52803 228 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 GAD2Q05329 585 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 PDPK2PQ6A1A2 396 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 RIPOR1Q6ZS17 1223 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 PID1Q7Z2X4 250 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 ANKRD27Q96NW4 1050 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 CADM1Q9BY67 442 aaKnown RBP11.79□□□□□ -0.52
SMAD9-202ENST00000379826 GRID1Q9ULK0 1009 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 LRP5O75197 1615 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 GOLGA8QA0A0J9YX86 632 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 GOLGA8OA6NCC3 632 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 KPNA7A9QM74 516 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 GOLGA8NF8WBI6 632 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 KLHL2O95198 593 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 CCNB1P14635 433 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 CRADDP78560 199 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 FSTL1Q12841 308 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 EFHC1Q5JVL4 640 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 CES3Q6UWW8 571 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 PDZD4Q76G19 769 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-202ENST00000379826 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-202ENST00000379826 CD101Q93033 1021 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 CPB2Q96IY4 423 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 WDR35Q9P2L0 1181 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 GSC2O15499 205 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 LYPLA1O75608 230 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-202ENST00000379826 ITGAVP06756 1048 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 CD48P09326 243 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 ETS2P15036 469 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms