RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 FAM149B1Q96BN6 582 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 CFAP57Q96MR6 1250 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 SLC2A13Q96QE2 648 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 GDF15Q99988 308 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 CNPY3Q9BT09 278 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 UBE2OQ9C0C9 1292 aaKnown RBP10.96□□□□□ -0.65
PDPN-203ENST00000376061 RXFP1Q9HBX9 757 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.96□□□□□ -0.65
PDPN-203ENST00000376061 FNIP2Q9P278 1114 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 AFF4Q9UHB7 1163 aaKnown RBP10.96□□□□□ -0.65
PDPN-203ENST00000376061 LZTS1Q9Y250 596 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 USTQ9Y2C2 406 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 SLC27A5Q9Y2P5 690 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 YBX2Q9Y2T7 364 aaKnown RBP10.96□□□□□ -0.65
PDPN-203ENST00000376061 PCDHA11Q9Y5I1 949 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 USP3Q9Y6I4 520 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 OBSL1O75147 1896 aa10.96□□□□□ -0.66
PDPN-203ENST00000376061 CCDC66A2RUB6 948 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 H0YGN5 161 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 RIOK3O14730 519 aaKnown RBP10.95□□□□□ -0.66
PDPN-203ENST00000376061 TEX28O15482 410 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 PSTPIP1O43586 416 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 LRCH4O75427 683 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 ABLIM3O94929 683 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 GLI1P08151 1106 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 ATF6P18850 670 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 DNAJB1P25685 340 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 SDC4P31431 198 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 PTPN9P43378 593 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 PEX5P50542 639 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 TUBB2AQ13885 445 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 WHAMMP3Q1A5X7 153 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 C15orf59Q2T9L4 293 aaPredicted RBP10.95□□□□□ -0.66
PDPN-203ENST00000376061 CCDC14Q49A88 953 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 OTUD1Q5VV17 481 aaPredicted RBP10.95□□□□□ -0.66
PDPN-203ENST00000376061 TPGS2Q68CL5 300 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 PM20D1Q6GTS8 502 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 ARFGAP1Q8N6T3 406 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 UBL4BQ8N7F7 174 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 GPR152Q8TDT2 470 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 UBE2Q2Q8WVN8 375 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 CAPZA3Q96KX2 299 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 C11orf84Q9BUA3 381 aaPredicted RBP10.95□□□□□ -0.66
PDPN-203ENST00000376061 TUBB2BQ9BVA1 445 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 ALG13Q9NP73 1137 aaKnown RBP10.95□□□□□ -0.66
PDPN-203ENST00000376061 MTUS1Q9ULD2 1270 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 SSX2IPQ9Y2D8 614 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 PCDHA3Q9Y5H8 950 aa10.95□□□□□ -0.66
PDPN-203ENST00000376061 MTCL1Q9Y4B5 1905 aaKnown RBP10.94□□□□□ -0.66
PDPN-203ENST00000376061 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.94□□□□□ -0.66
PDPN-203ENST00000376061 CES2O00748 559 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 SEC24AO95486 1093 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 LTFP02788 710 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 FYNP06241 537 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 CNPP09543 421 aaKnown RBP10.94□□□□□ -0.66
PDPN-203ENST00000376061 ATF2P15336 505 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 TFE3P19532 575 aaPredicted RBP10.94□□□□□ -0.66
PDPN-203ENST00000376061 MATKP42679 507 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 USP46P62068 366 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 RPL10AP62906 217 aaKnown RBP10.94□□□□□ -0.66
PDPN-203ENST00000376061 YWHAZP63104 245 aaKnown RBP10.94□□□□□ -0.66
PDPN-203ENST00000376061 SLC25A11Q02978 314 aaKnown RBP10.94□□□□□ -0.66
PDPN-203ENST00000376061 UBE3AQ05086 875 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 IFRD2Q12894 506 aaPredicted RBP10.94□□□□□ -0.66
PDPN-203ENST00000376061 ACAP1Q15027 740 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 CDO1Q16878 200 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 RAB6CQ53S08 254 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 SH3PXD2AQ5TCZ1 1133 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 CC2D1AQ6P1N0 951 aaPredicted RBP10.94□□□□□ -0.66
PDPN-203ENST00000376061 CREG2Q8IUH2 290 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 RHOT1Q8IXI2 618 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 DEFB106AQ8N104 65 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 NUP93Q8N1F7 819 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 ZNF461Q8TAF7 563 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 SPPL3Q8TCT6 385 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 FAM172AQ8WUF8 416 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 SPATA17Q96L03 361 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 TCF25Q9BQ70 676 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 DDX23Q9BUQ8 820 aaKnown RBP10.94□□□□□ -0.66
PDPN-203ENST00000376061 ADAM33Q9BZ11 813 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 RAB6CQ9H0N0 254 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 CARD9Q9H257 536 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 POPDC2Q9HBU9 364 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 NGRNQ9NPE2 291 aaKnown RBP10.94□□□□□ -0.66
PDPN-203ENST00000376061 ENTPD7Q9NQZ7 604 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.94□□□□□ -0.66
PDPN-203ENST00000376061 EHD2Q9NZN4 543 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 HSFX1Q9UBD0 423 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 SCML2Q9UQR0 700 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 YIPF1Q9Y548 306 aa10.94□□□□□ -0.66
PDPN-203ENST00000376061 TRANK1O15050 2925 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 PDE2AO00408 941 aaPredicted RBP10.93□□□□□ -0.66
PDPN-203ENST00000376061 GRM6O15303 877 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 RNF8O76064 485 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 CSPG5O95196 566 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 RB1P06400 928 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 MIPP30301 263 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 CA8P35219 290 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 PCK1P35558 622 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 GJC1P36383 396 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms