RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 ERMARDQ5T6L9 678 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 PRPF39Q86UA1 669 aaKnown RBP14.09□□□□□ -0.15
C9orf47-203ENST00000375851 NT5DC4Q86YG4 428 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 SLC9A9Q8IVB4 645 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 MTG1Q9BT17 334 aaPredicted RBP14.09□□□□□ -0.15
C9orf47-203ENST00000375851 KCTD10Q9H3F6 313 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 STARD7Q9NQZ5 370 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 TAS2R14Q9NYV8 317 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 FAM153AQ9UHL3 310 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 SLC24A2Q9UI40 661 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 UBR1Q8IWV7 1749 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 H7C4K7 107 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 STMN1P16949 149 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 ADIGQ0VDE8 80 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 BFSP2Q13515 415 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 IQSEC1Q6DN90 963 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 MRNIPQ6NTE8 343 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 NSL1Q96IY1 281 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 RUBCNLQ9H714 662 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 MANSC4A6NHS7 340 aaPredicted RBP14.09□□□□□ -0.15
C9orf47-203ENST00000375851 TIMM44O43615 452 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 AKR1A1P14550 325 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 TMEM132BQ14DG7 1078 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 PDCD2Q16342 344 aaPredicted RBP14.09□□□□□ -0.15
C9orf47-203ENST00000375851 SHROOM1Q2M3G4 852 aaPredicted RBP14.09□□□□□ -0.15
C9orf47-203ENST00000375851 SYTL3Q4VX76 610 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 CELF3Q5SZQ8 465 aaKnown RBP14.09□□□□□ -0.15
C9orf47-203ENST00000375851 PCYOX1LQ8NBM8 494 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 BAP1Q92560 729 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 GANQ9H2C0 597 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 NAALADL1Q9UQQ1 740 aa14.09□□□□□ -0.15
C9orf47-203ENST00000375851 SLC12A8A0AV02 714 aa14.08□□□□□ -0.15
C9orf47-203ENST00000375851 DCDC2CA8MYV0 355 aa14.08□□□□□ -0.15
C9orf47-203ENST00000375851 IGF2BP3O00425 579 aaKnown RBP eCLIP14.08□□□□□ -0.15
C9orf47-203ENST00000375851 APOA4P06727 396 aa14.08□□□□□ -0.15
C9orf47-203ENST00000375851 INPP1P49441 399 aa14.08□□□□□ -0.15
C9orf47-203ENST00000375851 NUMBP49757 651 aa14.08□□□□□ -0.15
C9orf47-203ENST00000375851 LRRC36Q1X8D7 754 aa14.08□□□□□ -0.15
C9orf47-203ENST00000375851 TIGD7Q6NT04 549 aaPredicted RBP14.08□□□□□ -0.15
C9orf47-203ENST00000375851 DENND1BQ6P3S1 775 aa14.08□□□□□ -0.15
C9orf47-203ENST00000375851 FOPNLQ96NB1 174 aa14.08□□□□□ -0.15
C9orf47-203ENST00000375851 ILKAPQ9H0C8 392 aaPredicted RBP14.08□□□□□ -0.15
C9orf47-203ENST00000375851 HOXA2O43364 376 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 ECM1Q16610 540 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 ZNF280DQ6N043 979 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 TMC3Q7Z5M5 1100 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 NUP93Q8N1F7 819 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 COLGALT1Q8NBJ5 622 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 C3orf20Q8ND61 904 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 SLC2A14Q8TDB8 520 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 TSC22D3Q99576 134 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 DNAJC18Q9H819 358 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 KCND1Q9NSA2 647 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 MRGBPQ9NV56 204 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 F8VP50 259 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 PDE2AO00408 941 aaPredicted RBP14.08□□□□□ -0.16
C9orf47-203ENST00000375851 DNALI1O14645 258 aaPredicted RBP14.08□□□□□ -0.16
C9orf47-203ENST00000375851 HMGCRP04035 888 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 EEF1DP29692 281 aaKnown RBP14.08□□□□□ -0.16
C9orf47-203ENST00000375851 PSEN2P49810 448 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 USP50Q70EL3 339 aaPredicted RBP14.08□□□□□ -0.16
C9orf47-203ENST00000375851 NLRP9Q7RTR0 991 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 SEPT8Q92599 483 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 HEY2Q9UBP5 337 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 RIPK2O43353 540 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 LRG1P02750 347 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 CKMP06732 381 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 SNHG28P0DPA3 235 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 MIPP30301 263 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 PTPN7P35236 360 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 PPIL2Q13356 520 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 MAGEB18Q96M61 343 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 KDM4CQ9H3R0 1056 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 CHST12Q9NRB3 414 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 UBP1Q9NZI7 540 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.08□□□□□ -0.16
C9orf47-203ENST00000375851 DCDC2Q9UHG0 476 aa14.08□□□□□ -0.16
C9orf47-203ENST00000375851 SYCE1LA8MT33 242 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 RALBP11234 206 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 PECAM1P16284 738 aaPredicted RBP14.07□□□□□ -0.16
C9orf47-203ENST00000375851 AXLP30530 894 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 DGKZQ13574 1117 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 ZDHHC17Q8IUH5 632 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 CCDC90BQ9GZT6 254 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 CRLS1Q9UJA2 301 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 DNPEPQ9ULA0 475 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 SNX5Q9Y5X3 404 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 RECQL4O94761 1208 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 GTF2H3Q13889 308 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 MTFR1Q15390 333 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 AGAP9Q5VTM2 703 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 AP1ARQ63HQ0 302 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 SPATA17Q96L03 361 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 TRPM5Q9NZQ8 1165 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 VPS9D1Q9Y2B5 631 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 MROH7Q68CQ1 1323 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 RCCD1A6NED2 376 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 E5RJQ4 531 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 NCAM2O15394 837 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 TGFB1I1O43294 461 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms