RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 MOXD2PA6NHM9 499 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 NFATC1O95644 943 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 HOXA13P31271 388 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 VCPP55072 806 aaKnown RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 GPM6BQ13491 265 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 KCTD6Q8NC69 237 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 GRAMD1AQ96CP6 724 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 PABPC5Q96DU9 382 aaKnown RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 TINF2Q9BSI4 451 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 FAM217BQ9NTX9 383 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 KLHL11Q9NVR0 708 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 RGS17Q9UGC6 210 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 NAGPAQ9UK23 515 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 SYNPO2Q9UMS6 1093 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 ZNF142P52746 1687 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 CEMIPQ8WUJ3 1361 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 MEIS2O14770 477 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 SCAMP1O15126 338 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 HS6ST1O60243 411 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 ACSL4O60488 711 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 LCP1P13796 627 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 ITGALP20701 1170 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 AXLP30530 894 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 PSEN2P49810 448 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 CCNHP51946 323 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 ORC2Q13416 577 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 CYFIP1Q7L576 1253 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 TOR1AIP2Q8NFQ8 470 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 E2F7Q96AV8 911 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 NECTIN4Q96NY8 510 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 RNF26Q9BY78 433 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 ASPSCR1Q9BZE9 553 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 TRIT1Q9H3H1 467 aaKnown RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 ATAD3AQ9NVI7 634 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 ZSCAN32Q9NX65 697 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 UNCXA6NJT0 531 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 CCDC188H7C350 402 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 ORC4O43929 436 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 PLS3P13797 630 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 PPP2R2AP63151 447 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 BTKQ06187 659 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 OASLQ15646 514 aaKnown RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 ALG11Q2TAA5 492 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 SMU1Q2TAY7 513 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 BBS9Q3SYG4 887 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 RUNDC3AQ59EK9 446 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 SCARA5Q6ZMJ2 495 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 PDIK1LQ8N165 341 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 MDM1Q8TC05 714 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 SETD7Q8WTS6 366 aaKnown RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 CELF1Q92879 486 aaKnown RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 TTC17Q96AE7 1141 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 UBXN6Q9BZV1 441 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 SIK2Q9H0K1 926 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 ZCWPW1Q9H0M4 648 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-206ENST00000367253 DNAJC12Q9UKB3 198 aa8.92□□□□□ -0.98
SYNE1-206ENST00000367253 CCDC78A2IDD5 438 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 NFIBO00712 420 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 COPEO14579 308 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 SYPP08247 313 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 EPB42P16452 691 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 ARRB1P49407 418 aaPredicted RBP8.91□□□□□ -0.98
SYNE1-206ENST00000367253 ARFIP2P53365 341 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 SLC7A5Q01650 507 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 CENPUQ71F23 418 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 RD3Q7Z3Z2 195 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 CRTAC1Q9NQ79 661 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 SLC35C2Q9NQQ7 365 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 ADM5C9JUS6 153 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 E7ENQ6 273 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 PEX12O00623 359 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 IL10P22301 178 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 PRKACBP22694 351 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 PDX1P52945 283 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 CCDC142Q17RM4 750 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 SPDYE7PQ495Y7 208 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 XXYLT1Q8NBI6 393 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 GPRASP2Q96D09 838 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 IL12RB2Q99665 862 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 NDUFA13Q9P0J0 144 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 USP27XA6NNY8 438 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 RAD51BO15315 384 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 RTN3O95197 1032 aaPredicted RBP8.91□□□□□ -0.98
SYNE1-206ENST00000367253 CCND1P24385 295 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 RFC2P35250 354 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 GJA9P57773 515 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 MCCD1P59942 119 aaPredicted RBP8.91□□□□□ -0.98
SYNE1-206ENST00000367253 MRPS25P82663 173 aaKnown RBP8.91□□□□□ -0.98
SYNE1-206ENST00000367253 TRIP10Q15642 601 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 TAGAPQ8N103 731 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 FAM98AQ8NCA5 519 aaKnown RBP8.91□□□□□ -0.98
SYNE1-206ENST00000367253 DNAJC9Q8WXX5 260 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 TP53INP1Q96A56 240 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 SPATC1LQ9H0A9 340 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.91□□□□□ -0.98
SYNE1-206ENST00000367253 CCDC134Q9H6E4 229 aa8.91□□□□□ -0.98
SYNE1-206ENST00000367253 METTL8Q9H825 291 aaKnown RBP8.91□□□□□ -0.98
SYNE1-206ENST00000367253 BRD7Q9NPI1 651 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms