RNA–Protein interactions for RNA: ENST00000359751.8

EFNA4-201, Transcript of ephrin A4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EFNA4, Length 1,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4-201ENST00000359751 VPS36Q86VN1 386 aa16.74■□□□□ 0.27
EFNA4-201ENST00000359751 MFSD6LQ8IWD5 586 aa16.74■□□□□ 0.27
EFNA4-201ENST00000359751 C1orf131Q8NDD1 294 aaKnown RBP16.74■□□□□ 0.27
EFNA4-201ENST00000359751 FEZF2Q8TBJ5 459 aa16.74■□□□□ 0.27
EFNA4-201ENST00000359751 SLC4A5Q9BY07 1137 aa16.74■□□□□ 0.27
EFNA4-201ENST00000359751 SLC46A2Q9BY10 475 aa16.74■□□□□ 0.27
EFNA4-201ENST00000359751 TRIM5Q9C035 493 aa16.74■□□□□ 0.27
EFNA4-201ENST00000359751 TTYH3Q9C0H2 523 aa16.74■□□□□ 0.27
EFNA4-201ENST00000359751 ABCC13Q9NSE7 274 aa16.74■□□□□ 0.27
EFNA4-201ENST00000359751 AIPL1Q9NZN9 384 aa16.74■□□□□ 0.27
EFNA4-201ENST00000359751 NAGPAQ9UK23 515 aa16.74■□□□□ 0.27
EFNA4-201ENST00000359751 STRIP2Q9ULQ0 834 aa16.74■□□□□ 0.27
EFNA4-201ENST00000359751 DUSP12Q9UNI6 340 aa16.74■□□□□ 0.27
EFNA4-201ENST00000359751 SPTBN5Q9NRC6 3674 aaKnown RBP16.74■□□□□ 0.27
EFNA4-201ENST00000359751 UNC80Q8N2C7 3258 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 SLC9A3R1O14745 358 aaPredicted RBP16.73■□□□□ 0.27
EFNA4-201ENST00000359751 TLR5O60602 858 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 GLI1P08151 1106 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 SCNN1AP37088 669 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 KPNA1P52294 538 aaPredicted RBP16.73■□□□□ 0.27
EFNA4-201ENST00000359751 ASIC2Q16515 512 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 ARHGAP29Q52LW3 1261 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 BTBD8Q5XKL5 378 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 PARM1Q6UWI2 310 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 RSRC2Q7L4I2 434 aaKnown RBP16.73■□□□□ 0.27
EFNA4-201ENST00000359751 GPRIN1Q7Z2K8 1008 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 BPIFB1Q8TDL5 484 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 RNF139Q8WU17 664 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 BAP1Q92560 729 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 DNASE1L2Q92874 299 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 IRF7Q92985 503 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 MSANTD3Q96H12 275 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 PPP1R13BQ96KQ4 1090 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 TRMT61BQ9BVS5 477 aaKnown RBP16.73■□□□□ 0.27
EFNA4-201ENST00000359751 ULBP1Q9BZM6 244 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 TRPV5Q9NQA5 729 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 SLC2A4RGQ9NR83 387 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 ASNSD1Q9NWL6 643 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 DNMT3LQ9UJW3 386 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 NOCTQ9UK39 431 aaKnown RBP16.73■□□□□ 0.27
EFNA4-201ENST00000359751 CAPN11Q9UMQ6 739 aa16.73■□□□□ 0.27
EFNA4-201ENST00000359751 MBL2P11226 248 aaPredicted RBP16.72■□□□□ 0.27
EFNA4-201ENST00000359751 DAOAP59103 153 aa16.72■□□□□ 0.27
EFNA4-201ENST00000359751 YWHAGP61981 247 aaKnown RBP eCLIP16.72■□□□□ 0.27
EFNA4-201ENST00000359751 FCHO2Q0JRZ9 810 aa16.72■□□□□ 0.27
EFNA4-201ENST00000359751 EFHC1Q5JVL4 640 aa16.72■□□□□ 0.27
EFNA4-201ENST00000359751 STXBP5Q5T5C0 1151 aa16.72■□□□□ 0.27
EFNA4-201ENST00000359751 DENND1BQ6P3S1 775 aa16.72■□□□□ 0.27
EFNA4-201ENST00000359751 NOP9Q86U38 636 aaKnown RBP16.72■□□□□ 0.27
EFNA4-201ENST00000359751 SLC44A3Q8N4M1 653 aa16.72■□□□□ 0.27
EFNA4-201ENST00000359751 DDX1Q92499 740 aaKnown RBP16.72■□□□□ 0.27
EFNA4-201ENST00000359751 FGF14Q92915 247 aa16.72■□□□□ 0.27
EFNA4-201ENST00000359751 EXOC4Q96A65 974 aa16.72■□□□□ 0.27
EFNA4-201ENST00000359751 ZSWIM3Q96MP5 696 aa16.72■□□□□ 0.27
EFNA4-201ENST00000359751 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.72■□□□□ 0.27
EFNA4-201ENST00000359751 CHORDC1Q9UHD1 332 aaPredicted RBP16.72■□□□□ 0.27
EFNA4-201ENST00000359751 BDP1A6H8Y1 2624 aa16.72■□□□□ 0.27
EFNA4-201ENST00000359751 CUL9Q8IWT3 2517 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 C2orf78A6NCI8 922 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 LRRC53A6NM62 1247 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 HEPACAM2A8MVW5 462 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 CHADO15335 359 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 PNMA6AP0CW24 399 aaPredicted RBP16.71■□□□□ 0.27
EFNA4-201ENST00000359751 RARGP13631 454 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 LCP1P13796 627 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 FCARP24071 287 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 PRKCIP41743 596 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 NSFP46459 744 aaKnown RBP16.71■□□□□ 0.27
EFNA4-201ENST00000359751 RGS7P49802 495 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 COG7P83436 770 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 AMPD2Q01433 879 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 MTA1Q13330 715 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 PDGFRLQ15198 375 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 ERICH1Q86X53 443 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 CNGA4Q8IV77 575 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 VSTM4Q8IW00 320 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 ARL14EPQ8N8R7 260 aaPredicted RBP16.71■□□□□ 0.27
EFNA4-201ENST00000359751 OTUB2Q96DC9 234 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 NECAB3Q96P71 396 aaPredicted RBP16.71■□□□□ 0.27
EFNA4-201ENST00000359751 COL25A1Q9BXS0 654 aaPredicted RBP16.71■□□□□ 0.27
EFNA4-201ENST00000359751 ACP6Q9NPH0 428 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 ZNHIT6Q9NWK9 470 aaKnown RBP16.71■□□□□ 0.27
EFNA4-201ENST00000359751 WDR35Q9P2L0 1181 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 TBC1D14Q9P2M4 693 aa16.71■□□□□ 0.27
EFNA4-201ENST00000359751 LSM7Q9UK45 103 aaKnown RBP16.71■□□□□ 0.27
EFNA4-201ENST00000359751 A0A1W2PQH9 124 aa16.7■□□□□ 0.26
EFNA4-201ENST00000359751 TULP2O00295 520 aa16.7■□□□□ 0.26
EFNA4-201ENST00000359751 ZNF263O14978 683 aa16.7■□□□□ 0.26
EFNA4-201ENST00000359751 COCHO43405 550 aa16.7■□□□□ 0.26
EFNA4-201ENST00000359751 HSF2BPO75031 334 aa16.7■□□□□ 0.26
EFNA4-201ENST00000359751 LTFP02788 710 aa16.7■□□□□ 0.26
EFNA4-201ENST00000359751 GLULP15104 373 aa16.7■□□□□ 0.26
EFNA4-201ENST00000359751 MLLT6P55198 1093 aaPredicted RBP16.7■□□□□ 0.26
EFNA4-201ENST00000359751 ARID5AQ03989 594 aa16.7■□□□□ 0.26
EFNA4-201ENST00000359751 KLHL30Q0D2K2 578 aa16.7■□□□□ 0.26
EFNA4-201ENST00000359751 USP4Q13107 963 aa16.7■□□□□ 0.26
EFNA4-201ENST00000359751 C10orf120Q5SQS8 335 aa16.7■□□□□ 0.26
EFNA4-201ENST00000359751 TAF3Q5VWG9 929 aa16.7■□□□□ 0.26
EFNA4-201ENST00000359751 TANGO2Q6ICL3 276 aa16.7■□□□□ 0.26
EFNA4-201ENST00000359751 DRC7Q8IY82 874 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms