RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 NOMO3P69849 1222 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 NFIXQ14938 502 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 STXBP5Q5T5C0 1151 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 UGT2A3Q6UWM9 527 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 KCTD6Q8NC69 237 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 SEMA4DQ92854 862 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 IKZF4Q9H2S9 585 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 TBC1D22BQ9NU19 505 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 KLHL11Q9NVR0 708 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 SIRPGQ9P1W8 387 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 HERC5Q9UII4 1024 aaKnown RBP12.75□□□□□ -0.37
TRERF1-202ENST00000354325 BCS1LQ9Y276 419 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 MYPNQ86TC9 1320 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 CNTNAP4Q9C0A0 1308 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.75□□□□□ -0.37
TRERF1-202ENST00000354325 TTLL13PA6NNM8 815 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 LDHAP00338 332 aaKnown RBP12.75□□□□□ -0.37
TRERF1-202ENST00000354325 PROCP04070 461 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 SERPINE1P05121 402 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 HMOX2P30519 316 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 CRHR1P34998 444 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 PPARGP37231 505 aaPredicted RBP12.75□□□□□ -0.37
TRERF1-202ENST00000354325 JAK3P52333 1124 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 SLC25A3Q00325 362 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 DLG1Q12959 904 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 TREML1Q86YW5 311 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 GSDMBQ8TAX9 411 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 CNBD2Q96M20 576 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 BIRC8Q96P09 236 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 RSAD1Q9HA92 442 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 ACP6Q9NPH0 428 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 ANKEF1Q9NU02 776 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 DNAJC28Q9NX36 388 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 AP4B1Q9Y6B7 739 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 NHSL1Q5SYE7 1610 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 A0A088AWK7 358 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 TCRBV9S1A1TA0A576 114 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 H7C0C1 242 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 BBOX1O75936 387 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 FAM155BO75949 473 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 MCF2P10911 925 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 TTKP33981 857 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 ATP5OP48047 213 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 AP3M2P53677 418 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 EFTUD2Q15029 972 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRERF1-202ENST00000354325 ABCB5Q2M3G0 1257 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 NADK2Q4G0N4 442 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 PDCD4Q53EL6 469 aaKnown RBP12.75□□□□□ -0.37
TRERF1-202ENST00000354325 OGFRL1Q5TC84 451 aaPredicted RBP12.75□□□□□ -0.37
TRERF1-202ENST00000354325 MAP4K3Q8IVH8 894 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 DEPDC1BQ8WUY9 529 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 SNRNP27Q8WVK2 155 aaKnown RBP12.75□□□□□ -0.37
TRERF1-202ENST00000354325 DCDC2Q9UHG0 476 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 DNAJC16Q9Y2G8 782 aa12.75□□□□□ -0.37
TRERF1-202ENST00000354325 KBTBD13C9JR72 458 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 MATN2O00339 956 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 ADRB2P07550 413 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 MMP10P09238 476 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 ETS1P14921 441 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 RPL22P35268 128 aaKnown RBP12.74□□□□□ -0.37
TRERF1-202ENST00000354325 LIG4P49917 911 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 CUL2Q13617 745 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 FLOT2Q14254 428 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 CCDC14Q49A88 953 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 PDPK2PQ6A1A2 396 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 SLFN12LQ6IEE8 588 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 CCDC80Q76M96 950 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 LPCAT2Q7L5N7 544 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 FNDC8Q8TC99 324 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 PRPF18Q99633 342 aaKnown RBP12.74□□□□□ -0.37
TRERF1-202ENST00000354325 RTKNQ9BST9 563 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 IGLV3-22A0A075B6J6 115 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 MLH1P40692 756 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 ERFP50548 548 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 METTL21CQ5VZV1 264 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 LRRC8BQ6P9F7 803 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 COA1Q9GZY4 146 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 POMPQ9Y244 141 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 AP4S1Q9Y587 144 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 IVNS1ABPQ9Y6Y0 642 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 TMEM191CA6NGB0 347 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 KPNA7A9QM74 516 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 DDX39AO00148 427 aaKnown RBP12.74□□□□□ -0.37
TRERF1-202ENST00000354325 LYPLA2O95372 231 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 TMEM191BP0C7N4 346 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 CCDC142Q17RM4 750 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 SERAC1Q96JX3 654 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 AGBL1Q96MI9 1066 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 HERPUD2Q9BSE4 406 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 VPS45Q9NRW7 570 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 RRN3Q9NYV6 651 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 CNTN3Q9P232 1028 aa12.74□□□□□ -0.37
TRERF1-202ENST00000354325 SDR42E2A6NKP2 422 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 MED7O43513 233 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 H2AFYO75367 372 aaKnown RBP12.73□□□□□ -0.37
TRERF1-202ENST00000354325 SUPT3HO75486 399 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 HLA-DRAP01903 254 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 RBP3P10745 1247 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 SFNP31947 248 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 GALK1P51570 392 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms