RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 GSDMBQ8TAX9 411 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 CLEC4DQ8WXI8 215 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 NMD3Q96D46 503 aaKnown RBP6.73□□□□□ -1.33
HMG20A-201ENST00000336216 PGLYRP2Q96PD5 576 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 PARK7Q99497 189 aaKnown RBP6.73□□□□□ -1.33
HMG20A-201ENST00000336216 RNPEPQ9H4A4 650 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 DENND2DQ9H6A0 471 aaPredicted RBP6.73□□□□□ -1.33
HMG20A-201ENST00000336216 DCLRE1BQ9H816 532 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 NDE1Q9NXR1 346 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 BFARQ9NZS9 450 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 BTBD7Q9P203 1132 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 CACNA1SQ13698 1873 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 A0A1W2PPM1 405 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 SMNDC1O75940 238 aaKnown RBP eCLIP6.73□□□□□ -1.33
HMG20A-201ENST00000336216 KRT38O76015 456 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 CHRM1P11229 460 aaPredicted RBP6.73□□□□□ -1.33
HMG20A-201ENST00000336216 TAC1P20366 129 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 GPD1P21695 349 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 ETFBP38117 255 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 AP3M2P53677 418 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 MAP3K7CLP57077 242 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 TPI1P60174 286 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 TSPY1Q01534 308 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 RIPK1Q13546 671 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 BMPR2Q13873 1038 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 RABGAP1LQ5R372 815 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 DENND1BQ6P3S1 775 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 NOTUMQ6P988 496 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 RFWD3Q6PCD5 774 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 TEX9Q8N6V9 391 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.73□□□□□ -1.33
HMG20A-201ENST00000336216 RAET1EQ8TD07 263 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 MORC4Q8TE76 937 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 ATP6V1E2Q96A05 226 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 ALKBH8Q96BT7 664 aaKnown RBP6.73□□□□□ -1.33
HMG20A-201ENST00000336216 GOLGA2P5Q9HBQ8 144 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 USP18Q9UMW8 372 aa6.73□□□□□ -1.33
HMG20A-201ENST00000336216 R3HDM2Q9Y2K5 976 aaKnown RBP6.73□□□□□ -1.33
HMG20A-201ENST00000336216 E5RJQ4 531 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 GOLGA8TH3BQL2 631 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 NEMP1O14524 444 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 PMPCBO75439 489 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 ANXA13P27216 316 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 ABCG1P45844 678 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 FKBP1AP62942 108 aaKnown RBP6.72□□□□□ -1.33
HMG20A-201ENST00000336216 PDE1CQ14123 709 aaPredicted RBP6.72□□□□□ -1.33
HMG20A-201ENST00000336216 GRIK4Q16099 956 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 VSTM1Q6UX27 236 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 IZUMO2Q6UXV1 221 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 ARID3BQ8IVW6 561 aaPredicted RBP6.72□□□□□ -1.33
HMG20A-201ENST00000336216 DDX27Q96GQ7 796 aaKnown RBP6.72□□□□□ -1.33
HMG20A-201ENST00000336216 TMEM176AQ96HP8 235 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 ATXN3LQ9H3M9 355 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 DDX56Q9NY93 547 aaKnown RBP6.72□□□□□ -1.33
HMG20A-201ENST00000336216 ANGPTL2Q9UKU9 493 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 HSPA4LO95757 839 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 LMNAP02545 664 aaKnown RBP6.72□□□□□ -1.33
HMG20A-201ENST00000336216 LGALS2P05162 132 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 ATP6V1B1P15313 513 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 PTPN4P29074 926 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 GARSP41250 739 aaKnown RBP6.72□□□□□ -1.33
HMG20A-201ENST00000336216 MMRN1Q13201 1228 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 KHDC1Q4VXA5 237 aaKnown RBP6.72□□□□□ -1.33
HMG20A-201ENST00000336216 TFDP3Q5H9I0 405 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 PPP1R2P3Q6NXS1 205 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 TLDC1Q6P9B6 456 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 DENND5BQ6ZUT9 1274 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 PLEKHH3Q7Z736 793 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 NDUFAF2Q8N183 169 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 THEM5Q8N1Q8 247 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 FBXO36Q8NEA4 188 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 DNERQ8NFT8 737 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 CELF6Q96J87 481 aaKnown RBP6.72□□□□□ -1.33
HMG20A-201ENST00000336216 SEPT5Q99719 369 aaPredicted RBP6.72□□□□□ -1.33
HMG20A-201ENST00000336216 ADAM7Q9H2U9 754 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 NMRK1Q9NWW6 199 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 CHKBQ9Y259 395 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 ROBO3Q96MS0 1386 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 ZBBXA8MT70 800 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 SPECC1L-ADORA2AF8WAN1 911 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 ACKR2O00590 384 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 CYB561D2O14569 222 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 SH3BP5O60239 455 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 TADA2AO75478 443 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 TGFB3P10600 412 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 MAPTP10636 758 aaKnown RBP6.72□□□□□ -1.33
HMG20A-201ENST00000336216 MYL2P10916 166 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 PECAM1P16284 738 aaPredicted RBP6.72□□□□□ -1.33
HMG20A-201ENST00000336216 ADSSP30520 456 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 PTGIRP43119 386 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 CRADDP78560 199 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 SPIRE1Q08AE8 756 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 PTK7Q13308 1070 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 FASTKD3Q14CZ7 662 aaKnown RBP6.72□□□□□ -1.33
HMG20A-201ENST00000336216 ANO4Q32M45 955 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 MGAT5BQ3V5L5 792 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 SH2D4BQ5SQS7 431 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 TMCO4Q5TGY1 634 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 MFSD14CQ5VZR4 134 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 NPNTQ6UXI9 565 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms