RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 ARHGAP10A1A4S6 786 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 CASTOR2A6NHX0 329 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 LACTBL1A8MY62 500 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 UBA1P22314 1058 aaKnown RBP10.24□□□□□ -0.77
TMOD3-201ENST00000308580 MAP4P27816 1152 aaKnown RBP10.24□□□□□ -0.77
TMOD3-201ENST00000308580 AADACL2Q6P093 401 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 ARHGAP18Q8N392 663 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 DNPEPQ9ULA0 475 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 F8VP50 259 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 ALDH1A3P47895 512 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 ST8SIA6P61647 398 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 GALNT4Q8N4A0 578 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 CEP19Q96LK0 163 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 GANQ9H2C0 597 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 GDF3Q9NR23 364 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 PDHXO00330 501 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 TIMM44O43615 452 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 FBXO21O94952 628 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 SSTR1P30872 391 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 ARHGEF7Q14155 803 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 SYTL3Q4VX76 610 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 EDEM1Q92611 657 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 AAR2Q9Y312 384 aaKnown RBP10.24□□□□□ -0.77
TMOD3-201ENST00000308580 MYOM1P52179 1685 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 ITGB5P18084 799 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 OCA2Q04671 838 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 SGO1Q5FBB7 561 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 SETD3Q86TU7 594 aaPredicted RBP10.24□□□□□ -0.77
TMOD3-201ENST00000308580 SCUBE3Q8IX30 993 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 WNK4Q96J92 1243 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 SYT15Q9BQS2 421 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 CINPQ9BW66 212 aaPredicted RBP10.24□□□□□ -0.77
TMOD3-201ENST00000308580 UBOX5O94941 541 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 FGRP09769 529 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 COLGALT1Q8NBJ5 622 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 TNFRSF25Q93038 417 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 TBCBQ99426 244 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 GPBP1L1Q9HC44 474 aaPredicted RBP10.24□□□□□ -0.77
TMOD3-201ENST00000308580 DCDC2Q9UHG0 476 aa10.24□□□□□ -0.77
TMOD3-201ENST00000308580 APOA4P06727 396 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 NQO1P15559 274 aaKnown RBP10.23□□□□□ -0.77
TMOD3-201ENST00000308580 BGNP21810 368 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 ALDH7A1P49419 539 aaKnown RBP10.23□□□□□ -0.77
TMOD3-201ENST00000308580 AQP5P55064 265 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 EFEMP1Q12805 493 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 LRRC23Q53EV4 343 aaPredicted RBP10.23□□□□□ -0.77
TMOD3-201ENST00000308580 STRA8Q7Z7C7 330 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 SUGP1Q8IWZ8 645 aaKnown RBP10.23□□□□□ -0.77
TMOD3-201ENST00000308580 FAM136AQ96C01 138 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 HSD17B14Q9BPX1 270 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 PORCNQ9H237 461 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 DDX43Q9NXZ2 648 aaKnown RBP10.23□□□□□ -0.77
TMOD3-201ENST00000308580 NINJ2Q9NZG7 142 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 PCDHB7Q9Y5E2 793 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 LHX1P48742 406 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 GTF2BQ00403 316 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 SLC27A1Q6PCB7 646 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 COLEC11Q9BWP8 271 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 PRPF4O43172 522 aaKnown RBP eCLIP10.23□□□□□ -0.77
TMOD3-201ENST00000308580 NUDT2P50583 147 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 CSE1LP55060 971 aaKnown RBP10.23□□□□□ -0.77
TMOD3-201ENST00000308580 RPL10AP62906 217 aaKnown RBP10.23□□□□□ -0.77
TMOD3-201ENST00000308580 MRNIPQ6NTE8 343 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 LNX1Q8TBB1 728 aaPredicted RBP10.23□□□□□ -0.77
TMOD3-201ENST00000308580 KDM4CQ9H3R0 1056 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 DNAJC16Q9Y2G8 782 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 UBIAD1Q9Y5Z9 338 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 SPATA31C1P0DKV0 1188 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 SLC11A2P49281 568 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 SREBF2Q12772 1141 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 MTDHQ86UE4 582 aaKnown RBP10.23□□□□□ -0.77
TMOD3-201ENST00000308580 TMEM161BQ8NDZ6 487 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 SPATA20Q8TB22 786 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 TMEM169Q96HH4 297 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 CELF6Q96J87 481 aaKnown RBP10.23□□□□□ -0.77
TMOD3-201ENST00000308580 CD248Q9HCU0 757 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.23□□□□□ -0.77
TMOD3-201ENST00000308580 RNF225M0QZC1 329 aaPredicted RBP10.23□□□□□ -0.77
TMOD3-201ENST00000308580 ATP9AO75110 1047 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 MICAL2O94851 1124 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 KCNA3P22001 575 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 ADORA2AP29274 412 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 MIPP30301 263 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 SERPINB8P50452 374 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 ZNF177Q13360 481 aaPredicted RBP10.23□□□□□ -0.77
TMOD3-201ENST00000308580 ETNPPLQ8TBG4 499 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 YWHAZP63104 245 aaKnown RBP10.23□□□□□ -0.77
TMOD3-201ENST00000308580 ADIGQ0VDE8 80 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 CDH18Q13634 790 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 CTXN3Q4LDR2 81 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 ERMARDQ5T6L9 678 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 AGAP9Q5VTM2 703 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 C4orf32Q8N8J7 132 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 KAT2BQ92831 832 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 ZNF446Q9NWS9 450 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 CRLS1Q9UJA2 301 aa10.23□□□□□ -0.77
TMOD3-201ENST00000308580 H0Y626 953 aa10.22□□□□□ -0.77
TMOD3-201ENST00000308580 RALBP11234 206 aa10.22□□□□□ -0.77
TMOD3-201ENST00000308580 EIF4BP23588 611 aaKnown RBP10.22□□□□□ -0.77
TMOD3-201ENST00000308580 TM4SF1P30408 202 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms